Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq582 199 4e-46 >seq582 Length=15002 Score = 199 bits (220), Expect = 4e-46 Identities = 600/910 (66%), Gaps = 35/910 (4%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| |||||||| || ||| | ||||| |||||||| || || || | Sbjct 2227 CATGACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGC 2168 Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 ||| || || | ||| || || || ||| || || |||| || || ||| | || Sbjct 2167 CAAGGAAAT-GTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTAC 2109 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 | | |||| || || ||| || || |||||||| | ||| || ||||||||| Sbjct 2108 CTAAAGCAAC-----CAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATC 2054 Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTA 93020 | ||||| || | ||| || ||||||||||| | ||| | ||||| ||||| Sbjct 2053 AGCGTTCATACCCAATAGAGAAACGGGTAGAGCGTCAATGAAGTATCTCTTT-TCGATCT 1995 Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTT-TTGTACGACA 93076 |||| |||||| | | |||| | || | | ||||| ||| || || | | | | Sbjct 1994 CAACAGCTTCTGTGATGATTCTTTCGAC---AATCTTTGGATCTGGCTTGTTCTTCAA-A 1939 Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 | || | | | ||| || ||||||||||| || |||||||| |||| | ||||| || Sbjct 1938 TGATGGAATAGTAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCG 1879 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 || |||||| |||||||| | || || ||||| | ||| || || | ||| || Sbjct 1878 TTTGAGAATGTCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAG 1819 Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCA---AAA 93253 |||||| ||||| | |||||||||||| || || || || | | ||| ||| | | Sbjct 1818 GAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGA 1759 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 | || | | | |||||| | | ||||| | || |||| || || || Sbjct 1758 GCTTCGTCGTCA---CGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGA 1702 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373 | ||||| || || || || | | | || |||| | | ||| ||||| || || Sbjct 1701 ATGGTTTCAATGGCATTCAACAAGAACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCA 1642 Query 93374 ATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAA 93433 || |||| ||||| | || || || | || ||||| ||||||||| |||||||| Sbjct 1641 ATCAACAACGAATAAGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAG 1582 Query 93434 CATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACT 93493 || | ||||| | || ||||| || || || | || || | ||||| || || Sbjct 1581 CACTTGGCTTCTGGAATTTGCACCTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACG 1522 Query 93494 ATACCATCGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCATC 93552 ||||||||||| || ||||| || || | | | || || ||| | |||| | || Sbjct 1521 ATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTG-GAGATGAAAAATCTCTCGTTCTC 1463 Query 93553 TTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCA 93609 || | || | ||| || ||||| || || | ||||| |||||| ||||||| Sbjct 1462 GTTCATTCTGTTGTTCCAGTCATGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCA 1403 Query 93610 AAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669 ||| || || || ||| | || || ||||| || || || || | ||||| || | Sbjct 1402 AAAAGAGGCCTCGGCTCTCTTATAAGCTTCCCAGATTTCGTGGTACTTGATTGGGAAAAG 1343 Query 93670 GACAAAACGA 93679 ||||||||| Sbjct 1342 CACAAAACGA 1333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556853171007040