Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq689 109 5e-19
seq493 109 5e-19
seq65 91.5 1e-13
>seq689
Length=43288
Score = 109 bits (120), Expect = 5e-19
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || || || ||||| || ||||| | ||||| ||| | | || ||| |
Sbjct 11236 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCAT 11295
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || |||||||||||||| ||||||||||| || |||||| | |
Sbjct 11296 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATT 11355
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || || || || || || | || | || || |||||||| |||||
Sbjct 11356 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAA 11415
Query 22407 AGAATCCACCATACATTTAGTTTTGCGA 22434
||||||||| | || || || ||| ||
Sbjct 11416 GGAATCCACCCTTCACTTGGTCTTGAGA 11443
>seq493
Length=23338
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || |||| ||||| || | || | ||||| ||| | ||
Sbjct 23126 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 23185
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || ||||||||||| |||||||| || || |||
Sbjct 23186 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 23245
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || || || || ||| | || | || || ||||||
Sbjct 23246 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 23305
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
|| ||||| ||||| ||| | || || || |||
Sbjct 23306 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTG 23338
>seq65
Length=9430
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/205 (70%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 129696 AATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGC 129755
||| || ||||| || ||||| || |||| | | || | ||| ||||| |||||
Sbjct 6924 AATAGAAGCCAAGTTACAGACAGCGGTTTCCTCTGGGTTAGAGTATTCGACGATTTCACA 6983
Query 129756 GCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGC 129815
||||| || | || || || ||||| | |||||||||||| ||| |||| |||||
Sbjct 6984 ACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGC 7043
Query 129816 ATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAA 129875
||||||||| | |||| | || || || |||||| ||| | ||| | || | |
Sbjct 7044 ATCTTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCA 7103
Query 129876 CAAGTCTCGAGCCTTGATCTGTCTT 129900
||| | | ||||||||| | |||||
Sbjct 7104 CAACTTTTGAGCCTTGA-CAGTCTT 7127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419722393483240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |