Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq973 145 3e-29
seq18 111 6e-19
seq6 105 3e-17
seq1037 98.7 4e-15
seq233 91.5 6e-13
seq35 84.2 9e-11
>seq973
Length=17052
Score = 145 bits (160), Expect = 3e-29
Identities = 225/320 (70%), Gaps = 11/320 (3%)
Strand=Plus/Minus
Query 451289 GCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTC 451348
|||||| |||| | | | ||||| | | || || ||||||||||| |||||||||
Sbjct 6870 GCAGAAAAATACCTAGATGAGCCAGTGGATAAAGCCGTTATTACTGTTCCTGCTTATTTC 6811
Query 451349 AATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTT 451408
|| ||| | || |||||||||| || ||||||||| || || || ||||| |||||
Sbjct 6810 AACGATTCTCAGAGGCAAGCAACAAAGGATGCAGGAACAATGGCGGGGTTAAAGGTTCTC 6751
Query 451409 CGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA 451468
|| | | ||||||||||| || ||||| || | || | | | | |
Sbjct 6750 CGTGTGGTAAATGAACCTACTGCTGCTGCATTAAGTTTCGGTTTGG---------ATGCA 6700
Query 451469 ACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTA 451528
| | || | |||| ||| | |||| |||| || || || ||||| ||| |
Sbjct 6699 CTAAATGATGGTATTATTGCAGTTTATGATCTTGGCGGTGGTACATTTGATATTTCCAT- 6641
Query 451529 CTTTCA-ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGG 451587
||| | || |||||||| || ||||| |||||||| |||||||||||||||||||||||
Sbjct 6640 CTTGGACATCGAAGATGGTGTTTTTGAGGTAAAGGCTACCAATGGTGATACTCATCTAGG 6581
Query 451588 AGGTGAAGATATTGATAATG 451607
||||| || |||||||||
Sbjct 6580 TGGTGAGGACTTTGATAATG 6561
>seq18
Length=55686
Score = 111 bits (122), Expect = 6e-19
Identities = 165/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 451222 AGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAA 451281
||||||||| || ||||| |||| |||||||||| || ||||| | || || |||||
Sbjct 55097 AGGTGAAACCAAGACTTTCTCTCCACAAGAAATTTCTTCCATGGTCTTGACCAAGATGAA 55038
Query 451282 AGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGC 451341
|||| || || | |||||| ||| | || || |||| || || ||
Sbjct 55037 GGAAATTGCTGAGGCCAAGATTGGTAAGAAGGTTGAGAAGGCTGTCGTTACCGTCCCAGC 54978
Query 451342 TTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAA 451401
|| ||||| ||||| ||| | ||||| || || ||||| || ||||||||||| ||
Sbjct 54977 ATACTTCAACGATGCTCAAAGACAAGCTACCAAGGATGCTGGTGCCATTGCTGGTTTGAA 54918
Query 451402 TGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGG 451455
||| | ||||||| || |||||||| || ||||| | || || || |||||
Sbjct 54917 CGTTTTGAGAATTATCAACGAACCTACCGCTGCTGCCATTGCTTACGGTCTAGG 54864
>seq6
Length=36685
Score = 105 bits (116), Expect = 3e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|| ||||| | || ||||| | || || |||||||| || || |||| ||||||
Sbjct 219 GGTAAGCCACAAATCCAAGTCGAATACAAGGGTGAAACCAAGGTCTTCACTCCAGAAGAA 160
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || |||||| | | || |||||||| ||||| || ||| || | ||||
Sbjct 159 ATCTCTTCTATGATCTTGACCAAAATGAAGGAAACTGCCGAATCCTACTTGGGTTGCAAG 100
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| | ||||| || |||| ||||| ||||| ||||| ||| | ||| | ||||||||
Sbjct 99 GTCAACGATGCCGTTGTTACCGTTCCAGCTTACTTCAACGATTCCCAAAGACAAGCAACC 40
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTT 451405
|| ||||| || ||||||||||| || |||
Sbjct 39 AAGGATGCTGGTACCATTGCTGGTTTGAACGTT 7
>seq1037
Length=16598
Score = 98.7 bits (108), Expect = 4e-15
Identities = 240/361 (66%), Gaps = 6/361 (2%)
Strand=Plus/Minus
Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301
|||| |||||||| || |||| || | ||||||||| | | || ||| ||||
Sbjct 12822 CTCCAGAAGAAATCTCCGGTATGATTTTGGGTAAAATGAAGCAGATTGCCGAAGAATACT 12763
Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361
| || ||||| |||| || |||| || || || || ||||| ||||| |||
Sbjct 12762 TGGGCAAGAAGGTTACCCATGCCGTTGTTACCGTGCCAGCATACTTCAACGATGCGCAAA 12703
Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421
| ||||||||||| || || || ||||| ||||| || || | |||| |||| |
Sbjct 12702 GACAAGCAACTAAGGACGCTGGTGCCATTGCCGGTTTGAACATTTTGAGAATCGTTAACG 12643
Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481
||||||| || |||||| | || || || || ||| || | |||| | ||| |
Sbjct 12642 AACCTACCGCCGCTGCTATCGCCTACGG-CTTGGACAA--GACCGAAA---ACGAACACC 12589
Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541
| || | || | ||| || ||||| || || ||| ||| | | || || |||
Sbjct 12588 AAATCATCGTTTATGACTTGGGTGGTGGTACCTTCGATGTCTCTTTGTTGTCTATCGAAA 12529
Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601
| || || |||||||| | || || ||||| ||||| | || ||||| ||| |||
Sbjct 12528 ACGGTGTCTTTGAAGTGCAAGCCACTGCCGGTGACACTCACTTGGGTGGTGAGGATTTTG 12469
Query 451602 A 451602
|
Sbjct 12468 A 12468
>seq233
Length=27536
Score = 91.5 bits (100), Expect = 6e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 163279 GAATTAGATAAACCATATGCATCTTTACAAATTGATGGTGGTGAACAAAAAGTTGGAAAT 163338
||||| || ||||||||| || | |||| ||||| | | | |||| |||||
Sbjct 20160 GAATTTGAAAAACCATATAAATTCTGTGAAATAGATGGAAGGATAGAGCAAGTAGGAAAC 20101
Query 163339 TTTAAAATAGAACCTCCTGGTATATTTTTAGGTAGAGGTTCCCATCCAAAAATAGGAAAA 163398
||| || |||||||| ||| | || ||| | ||| ||||||| || | || |||
Sbjct 20100 TTTCGTATCGAACCTCCCGGTTTGTTCAGGGGTCGTGGTGCCCATCCTAAGAATGGTAAA 20041
Query 163399 TGGAAAAGAAGAATATATCCAGAAGATGTTATTTTAAATTTAGATAAAAATGCACCTATT 163458
| ||| ||| | |||| ||||| |||||| || | ||| | || ||||||||||| |||
Sbjct 20040 TTGAAGAGACGTGTATACCCAGAGGATGTTGTTCTTAATCTTGACAAAAATGCACCAATT 19981
Query 163459 CCA 163461
|||
Sbjct 19980 CCA 19978
>seq35
Length=84627
Score = 84.2 bits (92), Expect = 9e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867
|| || ||||||||||| | ||||||||||| |||| ||| || || || || || ||
Sbjct 41725 GTGAAAACAACAGTTTTAGCAGGCATATTTAGCCCAATAGAGAATGTCTCTGTAGCAAAG 41666
Query 420868 A-AAACTTTAATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAAT 420926
| || |||||| | || ||| | | |||||||||| || |||||||| |||||| |
Sbjct 41665 AGAACCTTTAAAAACCCTTCTTGGA-AGAGAATTTCAATAACTTCTTTTAGAATAGGTAG 41607
Query 420927 TATACCAGAATGATG 420941
| || ||||||||
Sbjct 41606 AAGGCCGGAATGATG 41592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975690655974368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |