Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq973 145 3e-29 seq18 111 6e-19 seq6 105 3e-17 seq1037 98.7 4e-15 seq233 91.5 6e-13 seq35 84.2 9e-11 >seq973 Length=17052 Score = 145 bits (160), Expect = 3e-29 Identities = 225/320 (70%), Gaps = 11/320 (3%) Strand=Plus/Minus Query 451289 GCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTC 451348 |||||| |||| | | | ||||| | | || || ||||||||||| ||||||||| Sbjct 6870 GCAGAAAAATACCTAGATGAGCCAGTGGATAAAGCCGTTATTACTGTTCCTGCTTATTTC 6811 Query 451349 AATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTT 451408 || ||| | || |||||||||| || ||||||||| || || || ||||| ||||| Sbjct 6810 AACGATTCTCAGAGGCAAGCAACAAAGGATGCAGGAACAATGGCGGGGTTAAAGGTTCTC 6751 Query 451409 CGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA 451468 || | | ||||||||||| || ||||| || | || | | | | | Sbjct 6750 CGTGTGGTAAATGAACCTACTGCTGCTGCATTAAGTTTCGGTTTGG---------ATGCA 6700 Query 451469 ACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTA 451528 | | || | |||| ||| | |||| |||| || || || ||||| ||| | Sbjct 6699 CTAAATGATGGTATTATTGCAGTTTATGATCTTGGCGGTGGTACATTTGATATTTCCAT- 6641 Query 451529 CTTTCA-ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGG 451587 ||| | || |||||||| || ||||| |||||||| ||||||||||||||||||||||| Sbjct 6640 CTTGGACATCGAAGATGGTGTTTTTGAGGTAAAGGCTACCAATGGTGATACTCATCTAGG 6581 Query 451588 AGGTGAAGATATTGATAATG 451607 ||||| || ||||||||| Sbjct 6580 TGGTGAGGACTTTGATAATG 6561 >seq18 Length=55686 Score = 111 bits (122), Expect = 6e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 451222 AGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAA 451281 ||||||||| || ||||| |||| |||||||||| || ||||| | || || ||||| Sbjct 55097 AGGTGAAACCAAGACTTTCTCTCCACAAGAAATTTCTTCCATGGTCTTGACCAAGATGAA 55038 Query 451282 AGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGC 451341 |||| || || | |||||| ||| | || || |||| || || || Sbjct 55037 GGAAATTGCTGAGGCCAAGATTGGTAAGAAGGTTGAGAAGGCTGTCGTTACCGTCCCAGC 54978 Query 451342 TTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAA 451401 || ||||| ||||| ||| | ||||| || || ||||| || ||||||||||| || Sbjct 54977 ATACTTCAACGATGCTCAAAGACAAGCTACCAAGGATGCTGGTGCCATTGCTGGTTTGAA 54918 Query 451402 TGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGG 451455 ||| | ||||||| || |||||||| || ||||| | || || || ||||| Sbjct 54917 CGTTTTGAGAATTATCAACGAACCTACCGCTGCTGCCATTGCTTACGGTCTAGG 54864 >seq6 Length=36685 Score = 105 bits (116), Expect = 3e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || ||||| | || ||||| | || || |||||||| || || |||| |||||| Sbjct 219 GGTAAGCCACAAATCCAAGTCGAATACAAGGGTGAAACCAAGGTCTTCACTCCAGAAGAA 160 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || |||||| | | || |||||||| ||||| || ||| || | |||| Sbjct 159 ATCTCTTCTATGATCTTGACCAAAATGAAGGAAACTGCCGAATCCTACTTGGGTTGCAAG 100 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | ||||| || |||| ||||| ||||| ||||| ||| | ||| | |||||||| Sbjct 99 GTCAACGATGCCGTTGTTACCGTTCCAGCTTACTTCAACGATTCCCAAAGACAAGCAACC 40 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTT 451405 || ||||| || ||||||||||| || ||| Sbjct 39 AAGGATGCTGGTACCATTGCTGGTTTGAACGTT 7 >seq1037 Length=16598 Score = 98.7 bits (108), Expect = 4e-15 Identities = 240/361 (66%), Gaps = 6/361 (2%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||||| || |||| || | ||||||||| | | || ||| |||| Sbjct 12822 CTCCAGAAGAAATCTCCGGTATGATTTTGGGTAAAATGAAGCAGATTGCCGAAGAATACT 12763 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || ||||| |||| || |||| || || || || ||||| ||||| ||| Sbjct 12762 TGGGCAAGAAGGTTACCCATGCCGTTGTTACCGTGCCAGCATACTTCAACGATGCGCAAA 12703 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||||||||| || || || ||||| ||||| || || | |||| |||| | Sbjct 12702 GACAAGCAACTAAGGACGCTGGTGCCATTGCCGGTTTGAACATTTTGAGAATCGTTAACG 12643 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 ||||||| || |||||| | || || || || ||| || | |||| | ||| | Sbjct 12642 AACCTACCGCCGCTGCTATCGCCTACGG-CTTGGACAA--GACCGAAA---ACGAACACC 12589 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | || | || | ||| || ||||| || || ||| ||| | | || || ||| Sbjct 12588 AAATCATCGTTTATGACTTGGGTGGTGGTACCTTCGATGTCTCTTTGTTGTCTATCGAAA 12529 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 | || || |||||||| | || || ||||| ||||| | || ||||| ||| ||| Sbjct 12528 ACGGTGTCTTTGAAGTGCAAGCCACTGCCGGTGACACTCACTTGGGTGGTGAGGATTTTG 12469 Query 451602 A 451602 | Sbjct 12468 A 12468 >seq233 Length=27536 Score = 91.5 bits (100), Expect = 6e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 163279 GAATTAGATAAACCATATGCATCTTTACAAATTGATGGTGGTGAACAAAAAGTTGGAAAT 163338 ||||| || ||||||||| || | |||| ||||| | | | |||| ||||| Sbjct 20160 GAATTTGAAAAACCATATAAATTCTGTGAAATAGATGGAAGGATAGAGCAAGTAGGAAAC 20101 Query 163339 TTTAAAATAGAACCTCCTGGTATATTTTTAGGTAGAGGTTCCCATCCAAAAATAGGAAAA 163398 ||| || |||||||| ||| | || ||| | ||| ||||||| || | || ||| Sbjct 20100 TTTCGTATCGAACCTCCCGGTTTGTTCAGGGGTCGTGGTGCCCATCCTAAGAATGGTAAA 20041 Query 163399 TGGAAAAGAAGAATATATCCAGAAGATGTTATTTTAAATTTAGATAAAAATGCACCTATT 163458 | ||| ||| | |||| ||||| |||||| || | ||| | || ||||||||||| ||| Sbjct 20040 TTGAAGAGACGTGTATACCCAGAGGATGTTGTTCTTAATCTTGACAAAAATGCACCAATT 19981 Query 163459 CCA 163461 ||| Sbjct 19980 CCA 19978 >seq35 Length=84627 Score = 84.2 bits (92), Expect = 9e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867 || || ||||||||||| | ||||||||||| |||| ||| || || || || || || Sbjct 41725 GTGAAAACAACAGTTTTAGCAGGCATATTTAGCCCAATAGAGAATGTCTCTGTAGCAAAG 41666 Query 420868 A-AAACTTTAATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAAT 420926 | || |||||| | || ||| | | |||||||||| || |||||||| |||||| | Sbjct 41665 AGAACCTTTAAAAACCCTTCTTGGA-AGAGAATTTCAATAACTTCTTTTAGAATAGGTAG 41607 Query 420927 TATACCAGAATGATG 420941 | || |||||||| Sbjct 41606 AAGGCCGGAATGATG 41592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975690655974368