Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq65 143 1e-29 seq35 143 1e-29 >seq65 Length=9430 Score = 143 bits (158), Expect = 1e-29 Identities = 322/479 (67%), Gaps = 6/479 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||| |||| ||| |||||| | || | || ||| ||| ||| || | |||||| Sbjct 7209 ATTTGGAGAGAACAAAGTCCAATCTTCGTTCTTTTCGACTCTCTTCATGAAAAGATCTGG 7268 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||| | ||| || || ||||| || | |||||||| || ||||| |||||| | Sbjct 7269 GATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCT 7328 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | || | ||| || || ||||||||||||||||| || | || | || || ||| Sbjct 7329 GATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACC 7388 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 ||| || |||||||| || ||||| | ||||| | |||||||| | ||| Sbjct 7389 AGGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCAT 7448 Query 26128 TGGAACTAATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 ||||| |||| | ||| ||| ||||| || | | ||| | || || || || | || Sbjct 7449 TGGAA-TAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAA 7507 Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGA 26244 | | |||| || | ||| || |||||||| || || || ||||| || | | Sbjct 7508 TGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCA 7567 Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304 || || ||| |||| |||| || ||| | ||||| | | || ||||| || || Sbjct 7568 AA--GTGTCGTAAATACCTTCAATCGAATCTTCCTTCATGGCCACTAGGAAACATGATGA 7625 Query 26305 TAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATC 26363 | ||| | ||||| || || | ||| || | ||| || | ||| || || | |||| Sbjct 7626 CATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATC 7684 >seq35 Length=84627 Score = 143 bits (158), Expect = 1e-29 Identities = 181/248 (73%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 25901 AAATG--CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTG 25958 ||||| |||||| |||| | ||||| | |||||| | ||| |||||||| | | Sbjct 61071 AAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGGG 61130 Query 25959 CATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGA 26018 |||||||||| |||| || ||||||||||||||||| ||||||||| |||| | ||||| Sbjct 61131 CATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCATGATTCTTTCTTAGTTGTAAGA 61190 Query 26019 AATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTC 26078 | |||| ||| || ||||||||||| || || ||| ||| ||| | ||| Sbjct 61191 AGTCAATAATGTCACCATGCCATGGTTCCAAGTATATACAAAAGGCACCGGGGCGTTTGT 61250 Query 26079 CTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATC 26138 |||||||| || || |||||||| || | || ||||| || ||| || ||||| | Sbjct 61251 TCCCACCTTGGTCGACATATCTTGCCGTGTTGTTAAAAACCCGCAGCATAGGCACTAAGC 61310 Query 26139 CAGTTGAA 26146 || | ||| Sbjct 61311 CATTAGAA 61318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253036620018200