Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq582 190 3e-43
seq493 120 4e-22
seq689 116 5e-21
>seq582
Length=15002
Score = 190 bits (210), Expect = 3e-43
Identities = 553/841 (66%), Gaps = 20/841 (2%)
Strand=Plus/Minus
Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919
||| |||| ||| ||| ||| | || ||||||||||| || || || |||| || ||
Sbjct 2218 AGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAAT 2159
Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTAT--TAATTCG 17977
| |||||| || ||||| |||||| || || ||||| ||||| ||| |
Sbjct 2158 GTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTT--CTTGTTACCTAAAGCA 2101
Query 17978 TATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCT 18037
| || ||| ||||| ||||||||||| ||||| ||||||||| ||||||||
Sbjct 2100 ACCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCC 2041
Query 18038 AGTAGTCTGAAA--GGTAGAGCATCAAT-AATAAATTCTTTCTCTATCTCAACAGACTCT 18094
| ||| |||| |||||||| ||||| || | ||||| || |||||||||| ||
Sbjct 2040 AATAG--AGAAACGGGTAGAGCGTCAATGAAGTATCTCTTT-TCGATCTCAACAG---CT 1987
Query 18095 TTTATTATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAAT 18154
| | | ||| || || | | ||||| | || | | || || ||| |
Sbjct 1986 TCTGTGATGATTCTTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGT 1927
Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214
||||| ||||| || ||||| ||||||||||||||| | || |||||||| || ||
Sbjct 1926 AAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTC 1867
Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274
|| || ||||| | ||| | || || | ||| || || | ||||| || ||| ||
Sbjct 1866 AAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAA 1807
Query 18275 AATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTC 18334
|| | ||| || ||| |||||||| | ||||||||||| | | | || | ||
Sbjct 1806 AACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGC-ATATAGAGCTTCGTCGTC 1748
Query 18335 A-GTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGC 18393
| | |||||| | ||||||| | | || || || | || || ||
Sbjct 1747 ACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGC 1688
Query 18394 ATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATA 18453
||| ||||| || | || || | ||| || || |||||||| || ||||| |||||
Sbjct 1687 ATTCAACAAGAACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATA 1628
Query 18454 CATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGG 18513
| || || || ||| ||||||| || || |||| || || | | || || ||
Sbjct 1627 AGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGG 1568
Query 18514 ATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573
| ||| | ||| | || |||| ||||| || || || || ||||| || | ||
Sbjct 1567 AATTTGCACCTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGC 1508
Query 18574 TGCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGA---GATTGT 18629
|| || || || | || | | | |||||| | | || || || || | ||||
Sbjct 1507 AGCAAAGAACGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGT 1449
Query 18630 TCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGG 18689
|||| |||| | ||| || || | ||| | |||||| | ||||||||||| | ||||
Sbjct 1448 TCCAGTCATGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGG 1389
Query 18690 C 18690
|
Sbjct 1388 C 1388
>seq493
Length=23338
Score = 120 bits (132), Expect = 4e-22
Identities = 156/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || | ||||| || |||||||| || ||||||||| |||
Sbjct 23126 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 23185
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || || ||| || ||||| || ||||| || |||||||| |||
Sbjct 23186 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 23245
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | ||| |||||||| | |||||| |||||||| || || || |
Sbjct 23246 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACA-- 23303
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034
| ||||||| || | || ||||| || || ||
Sbjct 23304 ACATCCAAAAGGAATCTACCCTTCACTTGGTCTT 23337
>seq689
Length=43288
Score = 116 bits (128), Expect = 5e-21
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897
|| || |||||||| || || || || || ||||||||| |||||| | ||| ||
Sbjct 11243 AAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATTGACAAT 11302
Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957
|| || || || ||||| || ||||| || || ||||| |||||||||||||| | |
Sbjct 11303 GTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATCTTT 11362
Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGG 156015
|| |||||||| | ||||| |||||||| || || || | | ||||||| ||
Sbjct 11363 GCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACA--ACATCCAAAAGGAAT 11420
Query 156016 CGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || ||||| || || || ||| ||||||| |||
Sbjct 11421 CCACCCTTCACTTGGTCTTGAGACTAAGAGGTGGT 11455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731861973353600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |