Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq689 127 4e-24 seq493 114 3e-20 >seq689 Length=43288 Score = 127 bits (140), Expect = 4e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||||||||||||||| || | || || || || | || | || || ||| | Sbjct 11465 GTTCAATAATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGT 11406 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||| || |||| | || |||||||| |||||||||||||| ||||| |||| Sbjct 11405 TGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 11346 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 | || ||||| || ||||| || ||||| || || || ||||| || | || | Sbjct 11345 GGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAG 11286 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521 | ||||| ||||| | ||| ||||| |||||||| || || || Sbjct 11285 AAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTT 11243 >seq493 Length=23338 Score = 114 bits (126), Expect = 3e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || ||||| || |||| |||| |||||||| |||||||||||||| ||||| Sbjct 23308 GATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCT 23249 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||||| || || || || ||||| || ||||| || ||| || ||||| || | Sbjct 23248 TTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGT 23189 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || ||||| ||||| | ||||| || |||||||||| || || | || || || Sbjct 23188 GTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTG 23129 Query 192534 CAT 192536 ||| Sbjct 23128 CAT 23126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984466175439600