Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq689 127 4e-24
seq493 114 3e-20
>seq689
Length=43288
Score = 127 bits (140), Expect = 4e-24
Identities = 162/223 (73%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||||||||||||| || | || || || || | || | || || ||| |
Sbjct 11465 GTTCAATAATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGT 11406
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||| || |||| | || |||||||| |||||||||||||| ||||| ||||
Sbjct 11405 TGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 11346
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| || ||||| || ||||| || ||||| || || || ||||| || | || |
Sbjct 11345 GGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAG 11286
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
| ||||| ||||| | ||| ||||| |||||||| || || ||
Sbjct 11285 AAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTT 11243
>seq493
Length=23338
Score = 114 bits (126), Expect = 3e-20
Identities = 135/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || || ||||| || |||| |||| |||||||| |||||||||||||| |||||
Sbjct 23308 GATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCT 23249
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
||||| || || || || ||||| || ||||| || ||| || ||||| || |
Sbjct 23248 TTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGT 23189
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|| || ||||| ||||| | ||||| || |||||||||| || || | || || ||
Sbjct 23188 GTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTG 23129
Query 192534 CAT 192536
|||
Sbjct 23128 CAT 23126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984466175439600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |