Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq65 163 8e-35
seq654 109 2e-18
seq1000 100 8e-16
seq238 95.1 4e-14
seq281 87.8 5e-12
seq35 86.0 2e-11
>seq65
Length=9430
Score = 163 bits (180), Expect = 8e-35
Identities = 612/951 (64%), Gaps = 13/951 (1%)
Strand=Plus/Plus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646
||||||| |||| ||||| || || || |||| || |||||| || || ||||
Sbjct 6923 CAATAGAAGCCAAGTTACAGACAGCGGTTTCCTCTGGGTTAGAGTATTCGACGATTTCAC 6982
Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706
| |||| ||| ||| |||||| || || || ||||| || ||| || |||||||||
Sbjct 6983 AACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAG 7042
Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766
|||| |||||||| ||| ||||||| || || || | || || |||| || ||
Sbjct 7043 CATCTTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACC 7102
Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATAT--TTCATATA 155824
| | | | || || | ||| | | |||||| ||| || ||| || |
Sbjct 7103 ACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACA 7162
Query 155825 CAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAA 155884
|| ||| | || ||||||||| ||| || || || | || || | ||
Sbjct 7163 ATGC-TTCAA-ATTCATCACCGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAA 7220
Query 155885 CAGCGACCAAATTTTATTACCGATTACACGCTC--CATAAATACATCACTCGCCCAAATA 155942
|| | |||| || || | || || ||| ||| || | ||| ||| |
Sbjct 7221 CAAAGTCCAATCTTCGTT--CTTTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGT 7278
Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002
|| ||| | ||| ||||| || || | ||||| ||||| | | || | |
Sbjct 7279 GCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACG 7338
Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG 156062
|| || ||||| | || |||||| | |||| || || |||| ||||||
Sbjct 7339 AAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTG 7398
Query 156063 ---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
||||| || || || || |||||||| || ||||| |||| | ||| |||||||||
Sbjct 7399 TTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATA 7458
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
|| || ||||| || || || || ||| | ||||| | || |||| || |||||
Sbjct 7459 CCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATG 7518
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
|| | ||||||||||| | ||||| || || |||||||| | ||| | | ||
Sbjct 7519 TGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAA 7578
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
||||||||||| ||||| || | ||| | | ||| | || || | ||| || |
Sbjct 7579 ATACCTTCAATCGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGA 7638
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTATTAGACATATA 156358
|| || ||||| ||||| ||||| || | || || | || || |||| ||||||
Sbjct 7639 GGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTA-GAGACATTAG 7697
Query 156359 ATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCAT 156418
| ||| || ||| || ||| |||| || ||||| |||| || || || |||||
Sbjct 7698 GTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCAT 7757
Query 156419 CCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTC 156478
||| || ||||| || || ||| | || | |||| || | ||| | |||||
Sbjct 7758 GATCATGTGTTGAGGGCGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTC 7817
Query 156479 CAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529
|| || || || ||||| || | || | ||||| | || ||| ||||
Sbjct 7818 CAAGGTCTTGAAACCGAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAAT 7868
>seq654
Length=49239
Score = 109 bits (120), Expect = 2e-18
Identities = 254/381 (67%), Gaps = 4/381 (1%)
Strand=Plus/Plus
Query 59988 AACCAGTACCAATACCCTTTGTTCCATTGATAAGAATCATCGGGATAATTGGGATATAAT 60047
||||||| |||||||| | ||||||| | |||||| ||||| | || | ||
Sbjct 20688 AACCAGTCCCAATACCTTCACAACCATTGACCAAAATCATAGGGATTACAGGCAAGTACC 20747
Query 60048 AAACTGGCTCAACACTATCACCATCATCTTTTAAGTATGTTAAAACCTTGTCGTCAATTT 60107
| | || ||||| | | ||||||| | | ||| ||||| | ||||| |
Sbjct 20748 ATTCAGGTTCAACTGTTTGCTCATCATCCTGAATGTAGGTTAATAATGGATCGTCTAGAG 20807
Query 60108 CGGGAAATATAGCCCGAGTAATCTTGGATAATTGTGTGAAAATATACCTCTCGGAT--GC 60165
| ||| || | ||| ||||| | | |||||| ||||| ||||||| ||
Sbjct 20808 AGTTAAAGATTTTTCTAGTGATCTTATTAAGCTCTGTGAAGATATA--TCTCGGAGCAGC 20865
Query 60166 TGCGTCCTTGCCACCCATAAGACGGGTTCCAAATTGTCCGTTTGGCTGGAATAGATTAAT 60225
|| || || ||||| || | ||| || ||| ||||| || | || | | |||
Sbjct 20866 TGAATCTTTACCACCAGTAGCTCTGGTACCGAATGCACCGTTAGGTTTTAACAAGTAAAT 20925
Query 60226 GTTGTTAGAGCCTACGAAATTTTGAGCGAGACCAACAATAGCACCATTTAAACTGGCTTC 60285
||||||||| || || |||| ||| || | ||||||||| | || || |||||
Sbjct 20926 GTTGTTAGAACCAACAAAATCTTGGGCTAAACCAACAATCGTTTGATATAGGGAAGCTTC 20985
Query 60286 ACCGTGATGATATCCAGAATGTTCTGAAACATATCCACTGAATTGTGCGACTTTAATTTC 60345
||||||||| ||||| | |||||| |||||||| |||| | ||| || ||||| |||||
Sbjct 20986 ACCGTGATGGTATCCGGTATGTTCAGAAACATAACCACCTAGTTGGGCAACTTTGATTTC 21045
Query 60346 GGAGTGGAGTTTTTTCTTGAA 60366
|| | | ||| |||| ||
Sbjct 21046 TGATTTTAAATTTCTCTTAAA 21066
>seq1000
Length=16104
Score = 100 bits (110), Expect = 8e-16
Identities = 123/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||| ||| || ||| |||||||| | | |||| ||||||||| || |||||||| ||
Sbjct 13941 ATCGTAATGAACCATGATGTCTTCTAAAGCTTTGACTAAACGACGTTGGATATAACCGGT 13882
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| | |||||| ||||| ||||| || | ||| ||||||||||||| |||||||| ||
Sbjct 13881 TTCTGCTGTTTTCACAGCAGTATCGATCAAACCTTCACGACCACCCATCGCATGGAAAAA 13822
Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACC 302720
| |||| || || || | | | | ||| | |||||||||||
Sbjct 13821 GAATTCTTGAGGAGTTAAACCTCTCAAATAAGAGTTTTCAACGAAACC 13774
>seq238
Length=21018
Score = 95.1 bits (104), Expect = 4e-14
Identities = 260/392 (66%), Gaps = 10/392 (3%)
Strand=Plus/Plus
Query 288957 TAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGA 289013
|| || |||||| | || ||| |||||||| |||| ||| | ||| | ||||
Sbjct 16668 TAGAAGTTGATTCAAAGTGGCTTCTCTTTCATCGTTTGCACCACCCATTGCACCACCTTT 16727
Query 289014 ATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG--AA 289071
|| ||| ||| ||||||| |||||| |||||||| | ||| || | || | ||
Sbjct 16728 -TC-CTC-TTTCCTTACCAATAGCATCGATTTCGTCCACGAAGATAATTGCTGGGGCTAA 16784
Query 289072 TTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATT 289131
||| || || | | || || || | |||||||| || |||| ||||||| |||||
Sbjct 16785 CTTT--CTTGCGTTCTCGAACAAATCACGAACACGGGAAGCACCAACACCAACAAACATT 16842
Query 289132 TCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCC 289191
||||||||||| ||| | || || | |||| ||| |||||| || || |||
Sbjct 16843 TCTACAAATTCGGAACCTGACACAGACAAAAATGGAACACCTGCTTCACCGGCAGTAGCC 16902
Query 289192 CTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACT 289251
| || | | || |||||||| || ||||| || ||| | | | || |||| | |
Sbjct 16903 TTTGCTAACAAAGTTTTACCTGTACCTGGTGGACCAGATAAAATAGCACCTCTTGGGATT 16962
Query 289252 TTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGT 289311
| || || || || ||||| || | | ||| || | || | |||| || |
Sbjct 16963 TGAGCACCCAATTTTTTGTACTTCTCTGGCTTTTGTAAGAAATGGACGAATTCCATAATT 17022
Query 289312 TCATATTTTGCCTCATCACATCCTGCTACATC 289343
|| |||||| |||| ||| ||||| |||||
Sbjct 17023 TCGCTTTTTGCTTCATTACAACCTGCCACATC 17054
>seq281
Length=65337
Score = 87.8 bits (96), Expect = 5e-12
Identities = 208/310 (67%), Gaps = 6/310 (2%)
Strand=Plus/Plus
Query 251413 CCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTG 251472
||||| || ||| | |||||| ||| | ||||| ||||| || || | | ||
Sbjct 58764 CCACATATACCACAAATATGGACTCTGAATGCATCCGATGCTTCCATTAATCTTTCTTTT 58823
Query 251473 GTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGA 251532
||| || ||||||||||| ||||||||||||||| ||||| || ||||| | | |
Sbjct 58824 AAGAACGCAGCTGCACCGTGTGCAATCATACAATCACGTTCCATCTCTCCGAATCTTAAA 58883
Query 251533 CCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATG 251592
|||||||| | || ||||| || | ||||| | || ||| ||| ||||| |
Sbjct 58884 CCACCATCTCTAGATCTACCTTCTACCGGCTGCCTGGTTAGAACTTGCATTGGACCTCTT 58943
Query 251593 GAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCG 251652
| | ||| ||| || | |||||||| | | | |||||| | | |||||
Sbjct 58944 GCTCTTGCATGAATCTTGTCGTCCACCATATGTCTTAATCTTTGGTAGTAAGTAGGACCA 59003
Query 251653 ATGAAGATGCTCGAAGGCATTTGC-TCT--CCAGTTAGAGCGTTATACATAACTTCGTTT 251709
| ||| || | | | |||| || ||| ||||| || |||| ||||||||||||
Sbjct 59004 AAGAATAT--TTG-TGCCATTAGCTTCTTACCAGTGTGACCGTTGTACATAACTTCGAAA 59060
Query 251710 CCATTAGATT 251719
||| |||||
Sbjct 59061 CCACGAGATT 59070
>seq35
Length=84627
Score = 86.0 bits (94), Expect = 2e-11
Identities = 108/146 (74%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||| | ||||| | ||| ||||||||||||||||| | | | ||||||||| |
Sbjct 69734 GCACCATATGCAATAACACAGTCACGTTCCATTTCACCCAATCTTAAACCACCATCTCTA 69793
Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACC-CTGAGCACGATAATT 233391
|| ||||| | || |||||| |||||||| | |||||| || ||| || | ||
Sbjct 69794 GATCTACCTTCCGTTGGTTGACGCGTTAAAACGGCTCTTGGTCCTCTG-GCTCTGGCATG 69852
Query 233392 AATTTTATCTTTAACCATATGCTTCA 233417
|| |||||| ||||||||||||||
Sbjct 69853 CATCTTATCTAAAACCATATGCTTCA 69878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471796932001352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |