Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq1062 86.0 8e-12
seq654 86.0 8e-12
>seq1062
Length=20682
Score = 86.0 bits (94), Expect = 8e-12
Identities = 237/360 (66%), Gaps = 14/360 (4%)
Strand=Plus/Minus
Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460
|| ||||||||| ||||| |||| |||||| || || | |||| ||||||
Sbjct 8604 GAGCTTTTATGGTTTATTTCTGGTTGTACTGATGGTAAGAAACTCTCTGATCAAGGTGTG 8545
Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520
|| | ||| | | || || || ||||| | || || | | || |||| || |||
Sbjct 8544 AAGATCTGGGAAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGACTTACAGATAGA 8485
Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580
|| |||||||| || || ||||||| || |||||||| ||| || || ||||
Sbjct 8484 CGTGAGGGTGATTTGGGACCTGTTTATGGGTTCCAATGGAGGCATTTCGGAGCAGAATAC 8425
Query 172581 ATCGAC-TGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTAA 172639
| ||| ||||| ||||| |||||||||| || || || ||||| | ||| |
Sbjct 8424 AA-GACATGTGACGATGATTATTCAGGACAAGGTGTCGATCAGTTAAGCGATGTGATTCA 8366
Query 172640 TACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTCA 172699
|| || | ||||| || | ||||||||| | || || || ||| | | |
Sbjct 8365 TAAGTTGAAGAACAATCCTTATGATAGAAGGATTATCAT-----GTCGGCATGGAACCCT 8311
Query 172700 ACTTGAT------AAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAG 172753
|| ||| ||||||| |||||| || |||||| || | || |||||||||||
Sbjct 8310 CCT-GATTTCCCAAAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTTTATGTCAG 8252
>seq654
Length=49239
Score = 86.0 bits (94), Expect = 8e-12
Identities = 138/198 (70%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009
|| || ||||| ||| || |||| |||||| | ||||| || | || | || ||||||
Sbjct 21042 ATCAAAGTTGCCCAACTAGGTGGTTATGTTTCTGAACATACCGGATACCATCACGGTGAA 20983
Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 166069
||| | |||| || || || |||||||||||||||||| | || || ||
Sbjct 20982 GCTTCCCTATATCAAACGATTGTTGGTTTAGCCCAAGATTTTGTTGGTTCTAACAACAT- 20924
Query 166070 GCATTACTTG----AACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTC 166125
||||||| ||||| | ||| ||| ||||||||| || |||||||||||
Sbjct 20923 ---TTACTTGTTAAAACCTAACGGTGCATTCGGTACCAGAGCTACTGGTGGTAAAGATTC 20867
Query 166126 TGCTGCATCAAGATATAT 166143
||||| | ||||||||
Sbjct 20866 AGCTGCTCCGAGATATAT 20849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632480934892480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |