Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq1062 86.0 8e-12 seq654 86.0 8e-12 >seq1062 Length=20682 Score = 86.0 bits (94), Expect = 8e-12 Identities = 237/360 (66%), Gaps = 14/360 (4%) Strand=Plus/Minus Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460 || ||||||||| ||||| |||| |||||| || || | |||| |||||| Sbjct 8604 GAGCTTTTATGGTTTATTTCTGGTTGTACTGATGGTAAGAAACTCTCTGATCAAGGTGTG 8545 Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520 || | ||| | | || || || ||||| | || || | | || |||| || ||| Sbjct 8544 AAGATCTGGGAAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGACTTACAGATAGA 8485 Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580 || |||||||| || || ||||||| || |||||||| ||| || || |||| Sbjct 8484 CGTGAGGGTGATTTGGGACCTGTTTATGGGTTCCAATGGAGGCATTTCGGAGCAGAATAC 8425 Query 172581 ATCGAC-TGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTAA 172639 | ||| ||||| ||||| |||||||||| || || || ||||| | ||| | Sbjct 8424 AA-GACATGTGACGATGATTATTCAGGACAAGGTGTCGATCAGTTAAGCGATGTGATTCA 8366 Query 172640 TACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTCA 172699 || || | ||||| || | ||||||||| | || || || ||| | | | Sbjct 8365 TAAGTTGAAGAACAATCCTTATGATAGAAGGATTATCAT-----GTCGGCATGGAACCCT 8311 Query 172700 ACTTGAT------AAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAG 172753 || ||| ||||||| |||||| || |||||| || | || ||||||||||| Sbjct 8310 CCT-GATTTCCCAAAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTTTATGTCAG 8252 >seq654 Length=49239 Score = 86.0 bits (94), Expect = 8e-12 Identities = 138/198 (70%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009 || || ||||| ||| || |||| |||||| | ||||| || | || | || |||||| Sbjct 21042 ATCAAAGTTGCCCAACTAGGTGGTTATGTTTCTGAACATACCGGATACCATCACGGTGAA 20983 Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 166069 ||| | |||| || || || |||||||||||||||||| | || || || Sbjct 20982 GCTTCCCTATATCAAACGATTGTTGGTTTAGCCCAAGATTTTGTTGGTTCTAACAACAT- 20924 Query 166070 GCATTACTTG----AACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTC 166125 ||||||| ||||| | ||| ||| ||||||||| || ||||||||||| Sbjct 20923 ---TTACTTGTTAAAACCTAACGGTGCATTCGGTACCAGAGCTACTGGTGGTAAAGATTC 20867 Query 166126 TGCTGCATCAAGATATAT 166143 ||||| | |||||||| Sbjct 20866 AGCTGCTCCGAGATATAT 20849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632480934892480