Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq689 122 7e-23 seq493 120 2e-22 >seq689 Length=43288 Score = 122 bits (134), Expect = 7e-23 Identities = 160/217 (74%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| ||||| |||||||| ||||| ||||| || || | | || | | || || Sbjct 11436 ACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCC 11377 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | ||||||||||| || || || |||||||| || |||||||| Sbjct 11376 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTG- 11318 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | |||||| | || | ||||||||| ||| ||||| | ||| || || || Sbjct 11317 AATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGTCTT 11258 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793 ||||| ||||| || || | | ||| |||||||| Sbjct 11257 ACCAGTCAAGGTCTTGACGA--AACTG--TTTTAAAA 11225 >seq493 Length=23338 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| ||||| || ||||| ||||| ||||| || || | | || | | ||| || Sbjct 23334 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 23275 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | ||||||||||| || || || |||||||| || |||||||| Sbjct 23274 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 23215 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | || |||||| | || | ||||| ||| ||| ||||| | || ||||| || Sbjct 23214 ATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTA 23155 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| ||| || || || || ||||| Sbjct 23154 CCAGTTAGGGTCTTGACGAAAATTTGCAT 23126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385214054434536