Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq689 122 7e-23
seq493 120 2e-22
>seq689
Length=43288
Score = 122 bits (134), Expect = 7e-23
Identities = 160/217 (74%), Gaps = 6/217 (3%)
Strand=Plus/Minus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
||||| ||||| |||||||| ||||| ||||| || || | | || | | || ||
Sbjct 11436 ACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCC 11377
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
| ||| || |||||| | ||||||||||| || || || |||||||| || ||||||||
Sbjct 11376 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTG- 11318
Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756
||| || | |||||| | || | ||||||||| ||| ||||| | ||| || || ||
Sbjct 11317 AATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGTCTT 11258
Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793
||||| ||||| || || | | ||| ||||||||
Sbjct 11257 ACCAGTCAAGGTCTTGACGA--AACTG--TTTTAAAA 11225
>seq493
Length=23338
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
||||| ||||| || ||||| ||||| ||||| || || | | || | | ||| ||
Sbjct 23334 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 23275
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
| ||| || |||||| | ||||||||||| || || || |||||||| || ||||||||
Sbjct 23274 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 23215
Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757
| || |||||| | || | ||||| ||| ||| ||||| | || ||||| ||
Sbjct 23214 ATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTA 23155
Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||||| ||| || || || || |||||
Sbjct 23154 CCAGTTAGGGTCTTGACGAAAATTTGCAT 23126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385214054434536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |