Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq35 141 2e-28
seq65 129 1e-24
seq1000 95.1 3e-14
seq654 86.0 1e-11
>seq35
Length=84627
Score = 141 bits (156), Expect = 2e-28
Identities = 323/483 (67%), Gaps = 5/483 (1%)
Strand=Plus/Minus
Query 110514 TTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCT 110573
||| | || ||||||||| | | || | || || || ||||| ||||||||| | ||
Sbjct 61479 TTGTCATCATGCTTTCTTGTGGCTATGGAAGAAGACTCCATTGATGGTATTTATAAGACT 61420
Query 110574 CTTAAAGAA-ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGA 110632
||| | || |||||| | || || ||| ||||| || ||||| || || || |
Sbjct 61419 -TTACACAAGACTGCTTTGATATCGAAAGCATCTGGTGGTATTGGAATACATGTGTCGAA 61361
Query 110633 TATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCC 110692
||| | |||| || || ||||| || |||| ||| |||| | ||| | || ||
Sbjct 61360 TATAAGGGCAAATGGTGCTTATATCTCAGGGTCGAATGGTACTTCTAATGGCTTAGTGCC 61301
Query 110693 AATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT-- 110750
||| | | || || ||| |||| |||| |||||| | |||||||| || | |
Sbjct 61300 TATGCTGCGGGTTTTTAACAACACGGCAAGATATGTCGACCAAGGTGGGAACAAACGCCC 61241
Query 110751 -GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACT 110809
|| | ||| ||| || | ||||| |||||| || || |||| |||||| ||||
Sbjct 61240 CGGTGCCTTTTGTATATACTTGGAACCATGGCATGGTGACATTATTGACTTCTTACAACT 61181
Query 110810 TCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGAT 110869
| || ||||| ||| |||||| || || || || ||||||||||| | |||||
Sbjct 61180 AAGAAAGAATCATGGAAAAGAAGAAATGAGGGCCCGAGACTTATTTTATGCCCTATGGAT 61121
Query 110870 TTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCA 110929
| | ||| | || ||| |||||||| || | |||| ||||| || | |||| |
Sbjct 61120 TCCGGATCTTTTTATGCAACGTGTTGAAAATAATGAAGATTGGTCCATTTTTAGTCCAGA 61061
Query 110930 TCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989
| | | ||| ||||||| ||||| | ||| || || ||| || ||||| ||
Sbjct 61060 TGAAGCAACAGGTTTATCTGACTGCTATGGTACAGAATTCAAAACCCTATATGAAAAGTA 61001
Query 110990 TGA 110992
|||
Sbjct 61000 TGA 60998
>seq65
Length=9430
Score = 129 bits (142), Expect = 1e-24
Identities = 550/863 (64%), Gaps = 7/863 (1%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||| || |||||||| || | |||||| |||| || || | |||| || || |
Sbjct 7840 ACTACTTCGGTTTCAAGACCTTGGAACGTTCTTACTTGCTAAGAATCAACGGTAAGGTTG 7781
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
|||||| |||||||||||| | | | || || | ||||| || || ||||||
Sbjct 7780 CTGAACGCCCTCAACACATGATCATGAGAGTGGCTGTCGGTATCCACGGTAGAGATATTG 7721
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCT 110480
|| ||| | ||| ||| | || | | || || | | | || ||| | ||
Sbjct 7720 AAAAGGTTTTGGAAACTTACAACCTAATGTCTCTAA-GATACTTCACACACGCTTCGCCA 7662
Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540
|| || || || || || ||| | |||| || | || || || || | | ||
Sbjct 7661 ACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATG 7602
Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600
|| || ||||| |||||||||||||| || || | || ||| ||| | || |||||
Sbjct 7601 AAGGAAGATTCGATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAG 7542
Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660
| | |||| || |||||| | ||| |||| | ||||| || | || | | || ||
Sbjct 7541 ACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATTGCT 7482
Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720
| || ||| |||| | || || |||||||| | | || |||||| |||||||
Sbjct 7481 GGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCT 7422
Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777
|| || | ||||||||| |||||| ||| | || || | || |||| ||
Sbjct 7421 CGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCA 7362
Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837
||||| |||||||| || || ||| | || | | || || || || ||||||
Sbjct 7361 TGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATC 7302
Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897
| ||| | || || || ||| | ||||| ||||| | |||||||| | || ||
Sbjct 7301 CGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAA 7242
Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATAT 110957
| || | ||| || | | | ||| || | || || ||| | ||||| ||
Sbjct 7241 AAGAACGAAGATTGGACTTTGTTCTCTCCAAATGAAGCACCAGGCCTACCAGATGTTTAC 7182
Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAA 111017
|| | || ||||||| | |||||| || || | ||||||| || ||| |
Sbjct 7181 GGTGATGAATTTGAAGCATTGTACGAACGTTACGAGAGAGAAGGC-CGTGGTAGAAAGAC 7123
Query 111018 ATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCC 111076
|| | |||||| | | |||| | ||| | ||| | ||| |||||||| || ||
Sbjct 7122 TGTCAAGGCTCAAAAGTTGTGGTACGCTATCTTGGAAGCTCAAACCGAAACTGGTACCCC 7063
Query 111077 TTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAAT 111136
| || | || |||||| | ||| || |||||||| ||| || || || ||
Sbjct 7062 ATTCATGCTATACAAAGATGCTTGTAACAAGAAGAGTAATCAAAAGAACTTGGGTACTAT 7003
Query 111137 TAAGTCTAGTAATTTGTGCTGTG 111159
|||||| || ||||| ||||
Sbjct 7002 CAAGTCTTCGAACTTGTGTTGTG 6980
>seq1000
Length=16104
Score = 95.1 bits (104), Expect = 3e-14
Identities = 127/173 (73%), Gaps = 4/173 (2%)
Strand=Plus/Plus
Query 305317 TGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGC 305376
|||||||||| ||| | |||||| | |||||||| || || || ||||||||||||||
Sbjct 12693 TGACAATGATCCCGTTTTATTCAATCGTCAACCATCCCTTCACAAGATGTCTATGATGGC 12752
Query 305377 TCATAAAGTCAAAGTATTAT-CTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACG 305434
|| | ||| || | |||| | ||| ||||| | ||||| | || | |
Sbjct 12753 ACACAGAGTTAAGG--TTATGCCATATTCTACATTCAGGCTAAATTTGTCTGTTACATCC 12810
Query 305435 CCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
||||||||||| |||||||| || |||||||||||| | || || || |||||
Sbjct 12811 CCTTATAATGCAGATTTTGACGGTGATGAAATGAATTTACACGTTCCACAATC 12863
>seq654
Length=49239
Score = 86.0 bits (94), Expect = 1e-11
Identities = 142/204 (70%), Gaps = 6/204 (3%)
Strand=Plus/Minus
Query 279857 TCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGT 279916
||||||||| || | ||||| | |||||| || | ||| |||| | |||
Sbjct 21126 TCTATTCCTTCCGTATTAGATGGGCTAAAACCTGGTCAAAGAAAGGTTATCTATGCCTGT 21067
Query 279917 TTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAA 279976
|| || ||||| || | ||||| ||||| || ||| ||||||||||| |||
Sbjct 21066 TTTAAGAGAAATTTAAAATCAGAAATCAAAGTTGCCCAACTAGGTGGTTATGTTTCTGAA 21007
Query 279977 CATGCAGGTTATCATCACGGTGAAGCGTCTCT---TCAAGGTGCTATTGTAGGTCTTGCC 280033
||| | || || |||||||||||||| || || |||| | ||||| ||| | |||
Sbjct 21006 CATACCGGATACCATCACGGTGAAGCTTCCCTATATCAAA---CGATTGTTGGTTTAGCC 20950
Query 280034 CAAGATTTTATGGCTTCAAACAAC 280057
||||||||| | | ||| ||||||
Sbjct 20949 CAAGATTTTGTTGGTTCTAACAAC 20926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186796134181256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |