Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq35 141 2e-28 seq65 129 1e-24 seq1000 95.1 3e-14 seq654 86.0 1e-11 >seq35 Length=84627 Score = 141 bits (156), Expect = 2e-28 Identities = 323/483 (67%), Gaps = 5/483 (1%) Strand=Plus/Minus Query 110514 TTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCT 110573 ||| | || ||||||||| | | || | || || || ||||| ||||||||| | || Sbjct 61479 TTGTCATCATGCTTTCTTGTGGCTATGGAAGAAGACTCCATTGATGGTATTTATAAGACT 61420 Query 110574 CTTAAAGAA-ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGA 110632 ||| | || |||||| | || || ||| ||||| || ||||| || || || | Sbjct 61419 -TTACACAAGACTGCTTTGATATCGAAAGCATCTGGTGGTATTGGAATACATGTGTCGAA 61361 Query 110633 TATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCC 110692 ||| | |||| || || ||||| || |||| ||| |||| | ||| | || || Sbjct 61360 TATAAGGGCAAATGGTGCTTATATCTCAGGGTCGAATGGTACTTCTAATGGCTTAGTGCC 61301 Query 110693 AATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT-- 110750 ||| | | || || ||| |||| |||| |||||| | |||||||| || | | Sbjct 61300 TATGCTGCGGGTTTTTAACAACACGGCAAGATATGTCGACCAAGGTGGGAACAAACGCCC 61241 Query 110751 -GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACT 110809 || | ||| ||| || | ||||| |||||| || || |||| |||||| |||| Sbjct 61240 CGGTGCCTTTTGTATATACTTGGAACCATGGCATGGTGACATTATTGACTTCTTACAACT 61181 Query 110810 TCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGAT 110869 | || ||||| ||| |||||| || || || || ||||||||||| | ||||| Sbjct 61180 AAGAAAGAATCATGGAAAAGAAGAAATGAGGGCCCGAGACTTATTTTATGCCCTATGGAT 61121 Query 110870 TTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCA 110929 | | ||| | || ||| |||||||| || | |||| ||||| || | |||| | Sbjct 61120 TCCGGATCTTTTTATGCAACGTGTTGAAAATAATGAAGATTGGTCCATTTTTAGTCCAGA 61061 Query 110930 TCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989 | | | ||| ||||||| ||||| | ||| || || ||| || ||||| || Sbjct 61060 TGAAGCAACAGGTTTATCTGACTGCTATGGTACAGAATTCAAAACCCTATATGAAAAGTA 61001 Query 110990 TGA 110992 ||| Sbjct 61000 TGA 60998 >seq65 Length=9430 Score = 129 bits (142), Expect = 1e-24 Identities = 550/863 (64%), Gaps = 7/863 (1%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| || |||||||| || | |||||| |||| || || | |||| || || | Sbjct 7840 ACTACTTCGGTTTCAAGACCTTGGAACGTTCTTACTTGCTAAGAATCAACGGTAAGGTTG 7781 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 |||||| |||||||||||| | | | || || | ||||| || || |||||| Sbjct 7780 CTGAACGCCCTCAACACATGATCATGAGAGTGGCTGTCGGTATCCACGGTAGAGATATTG 7721 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCT 110480 || ||| | ||| ||| | || | | || || | | | || ||| | || Sbjct 7720 AAAAGGTTTTGGAAACTTACAACCTAATGTCTCTAA-GATACTTCACACACGCTTCGCCA 7662 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 || || || || || || ||| | |||| || | || || || || | | || Sbjct 7661 ACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATG 7602 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 || || ||||| |||||||||||||| || || | || ||| ||| | || ||||| Sbjct 7601 AAGGAAGATTCGATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAG 7542 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 | | |||| || |||||| | ||| |||| | ||||| || | || | | || || Sbjct 7541 ACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACCGGTTCTTACATTGCT 7482 Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720 | || ||| |||| | || || |||||||| | | || |||||| ||||||| Sbjct 7481 GGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCT 7422 Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777 || || | ||||||||| |||||| ||| | || || | || |||| || Sbjct 7421 CGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCA 7362 Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837 ||||| |||||||| || || ||| | || | | || || || || |||||| Sbjct 7361 TGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATC 7302 Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897 | ||| | || || || ||| | ||||| ||||| | |||||||| | || || Sbjct 7301 CGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAA 7242 Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATAT 110957 | || | ||| || | | | ||| || | || || ||| | ||||| || Sbjct 7241 AAGAACGAAGATTGGACTTTGTTCTCTCCAAATGAAGCACCAGGCCTACCAGATGTTTAC 7182 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAA 111017 || | || ||||||| | |||||| || || | ||||||| || ||| | Sbjct 7181 GGTGATGAATTTGAAGCATTGTACGAACGTTACGAGAGAGAAGGC-CGTGGTAGAAAGAC 7123 Query 111018 ATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCC 111076 || | |||||| | | |||| | ||| | ||| | ||| |||||||| || || Sbjct 7122 TGTCAAGGCTCAAAAGTTGTGGTACGCTATCTTGGAAGCTCAAACCGAAACTGGTACCCC 7063 Query 111077 TTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAAT 111136 | || | || |||||| | ||| || |||||||| ||| || || || || Sbjct 7062 ATTCATGCTATACAAAGATGCTTGTAACAAGAAGAGTAATCAAAAGAACTTGGGTACTAT 7003 Query 111137 TAAGTCTAGTAATTTGTGCTGTG 111159 |||||| || ||||| |||| Sbjct 7002 CAAGTCTTCGAACTTGTGTTGTG 6980 >seq1000 Length=16104 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/173 (73%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 305317 TGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGC 305376 |||||||||| ||| | |||||| | |||||||| || || || |||||||||||||| Sbjct 12693 TGACAATGATCCCGTTTTATTCAATCGTCAACCATCCCTTCACAAGATGTCTATGATGGC 12752 Query 305377 TCATAAAGTCAAAGTATTAT-CTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACG 305434 || | ||| || | |||| | ||| ||||| | ||||| | || | | Sbjct 12753 ACACAGAGTTAAGG--TTATGCCATATTCTACATTCAGGCTAAATTTGTCTGTTACATCC 12810 Query 305435 CCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 ||||||||||| |||||||| || |||||||||||| | || || || ||||| Sbjct 12811 CCTTATAATGCAGATTTTGACGGTGATGAAATGAATTTACACGTTCCACAATC 12863 >seq654 Length=49239 Score = 86.0 bits (94), Expect = 1e-11 Identities = 142/204 (70%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 279857 TCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGT 279916 ||||||||| || | ||||| | |||||| || | ||| |||| | ||| Sbjct 21126 TCTATTCCTTCCGTATTAGATGGGCTAAAACCTGGTCAAAGAAAGGTTATCTATGCCTGT 21067 Query 279917 TTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAA 279976 || || ||||| || | ||||| ||||| || ||| ||||||||||| ||| Sbjct 21066 TTTAAGAGAAATTTAAAATCAGAAATCAAAGTTGCCCAACTAGGTGGTTATGTTTCTGAA 21007 Query 279977 CATGCAGGTTATCATCACGGTGAAGCGTCTCT---TCAAGGTGCTATTGTAGGTCTTGCC 280033 ||| | || || |||||||||||||| || || |||| | ||||| ||| | ||| Sbjct 21006 CATACCGGATACCATCACGGTGAAGCTTCCCTATATCAAA---CGATTGTTGGTTTAGCC 20950 Query 280034 CAAGATTTTATGGCTTCAAACAAC 280057 ||||||||| | | ||| |||||| Sbjct 20949 CAAGATTTTGTTGGTTCTAACAAC 20926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186796134181256