Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq65 230 3e-55
seq582 205 1e-47
seq35 120 4e-22
>seq65
Length=9430
Score = 230 bits (254), Expect = 3e-55
Identities = 749/1145 (65%), Gaps = 30/1145 (3%)
Strand=Plus/Plus
Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408
|||||||| |||| || | ||||||||||| |||||||| || || ||||| || ||
Sbjct 7000 TTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCTTTGTATAGCATG 7059
Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT--AGCAT 69466
|| || ||||||||||| | |||| ||| | |||| | ||| | || | ||| |
Sbjct 7060 AATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCT 7117
Query 69467 TTATTACGGTCTTG-TA--ACG--CTTCTCTTTTTCATATTGT--GTATATAGCCGTTCG 69519
| | | ||||| || ||| ||||||| | | || || ||| | || |||
Sbjct 7118 TGA---CAGTCTTTCTACCACGGCCTTCTCTCT--CGTAACGTTCGTACAATGC--TTCA 7170
Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579
|||||||| || ||||||| | || || |||||||||| | | ||| | |||
Sbjct 7171 AATTCATCACCGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAAAGTCCA- 7229
Query 69580 ACATCATCATCCTTA---ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636
||| || | ||| |||| ||||| || ||||| || ||||| || ||| ||
Sbjct 7230 --ATCTTCGTTCTTTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAAC 7287
Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696
| ||||| | | ||||||| || || || ||| | | |||| || || |
Sbjct 7288 AAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAG 7347
Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756
||||| || |||||||| || | || | || | | | || |||| || || || ||
Sbjct 7348 ATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCT 7407
Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816
|| || | ||| | |||||||| || | || | | ||| ||||||||||| |||||
Sbjct 7408 TGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAA 7467
Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876
|||| || || |||| ||| ||| || | | ||||| || ||| | |||
Sbjct 7468 GTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCA 7527
Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936
|| || || || | |||||||| | ||||| ||||| ||||| || ||||| ||
Sbjct 7528 ATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCA 7587
Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996
|| ||| || ||||| | || ||||| |||||||| |||| ||| ||
Sbjct 7588 ATCGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCA 7647
Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056
||||| || | ||| || || ||||| ||||| || || ||| | || ||||| |||
Sbjct 7648 GCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTT 7707
Query 70057 TCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115
|| | | | ||| ||||| | || | || || || | || || | ||| | ||| ||
Sbjct 7708 TCCAAAACCTTTTCAATATCTCTACCG-TGGATACCGACAGCCACTCTCATGATCATGTG 7766
Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175
||||| ||||| | ||| || ||| | | || ||| || ||||| || ||
Sbjct 7767 TTGAGGGCGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTT 7826
Query 70176 AAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235
|| || || |||||| || || ||||| ||||| | ||| |||| || | ||||
Sbjct 7827 GAAACCGAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAATTGCAGAGTTCAAAGTATC 7886
Query 70236 CTTATATTTGGTAACTATATCCATA-ACAGTAGGTGAGATAATCGGAGATCGTTTACCAT 70294
|| | || | || || | |||| || | || || || || || | |||||
Sbjct 7887 TTTGTTTTCCATGACGATGT-CATACACCTCATCCGAAATCATAGGCGAGTGAATACCAG 7945
Query 70295 TTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTT 70354
| || || || || | || | || ||||| | || | ||| | || | ||||
Sbjct 7946 TCTTTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTT 8005
Query 70355 CCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTG 70414
|||||| || || || || || ||||| || || | | |||| || || || || |
Sbjct 8006 GCTTGTGCAAGTTAGAAATAGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGG 8065
Query 70415 TAGTACAAGTA-GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCG 70473
| || || ||| || | |||| ||||| || |||||||||| | ||| || || ||
Sbjct 8066 TGGT-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCT 8124
Query 70474 TTATA 70478
| |||
Sbjct 8125 TCATA 8129
Score = 150 bits (166), Expect = 2e-31
Identities = 534/822 (65%), Gaps = 17/822 (2%)
Strand=Plus/Plus
Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422
|||| || | || ||||| || | | ||||| | || || | ||||||||||||||
Sbjct 5993 CCTTGTCAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGATAGTACATAC 6052
Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482
|||| |||| ||| ||||||||||||||||||| || | || | |||
Sbjct 6053 CGGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 6112
Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542
|| | || ||||| |||| |||||| |||||||||| |||| | | || || |
Sbjct 6113 GAGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATGTAAGCAGCACGGTCAGCGG 6172
Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCT--TAAAAATCTGTTTGAT 68600
|||| | ||||| |||||| | |||||||||| ||||| || |||||| || | |
Sbjct 6173 CCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGCT 6232
Query 68601 ATCATCTGGAAGGCTCGTA--TTTTGAATGGATCCACCATCGGATATAATTATATTCTTG 68658
| | ||| | | | | ||||| || || ||| ||| | || || |||
Sbjct 6233 CTTGT-GGGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTC 6291
Query 68659 ATCTCATCATTCCACAATTTTC-TCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTAT 68717
|| | |||| ||| ||| | || ||| | | || | | || || || ||
Sbjct 6292 ATAGCTTCATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGAT 6350
Query 68718 TTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 68777
||| ||||| ||||||||||| | ||||| ||| || || || ||||| || | | |
Sbjct 6351 TTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACA 6410
Query 68778 TTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACT 68837
|| || | |||| |||||||| || || ||||||||||| || || | ||| |||
Sbjct 6411 CTCGTTGTAACCCAAAATTTGAGATGTAGAAGCAGTTGGCATTGGAGCGAGCAACAAAGA 6470
Query 68838 ATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGA 68897
||||| ||||| ||| |||||| | | || | | | ||| ||||| || | ||
Sbjct 6471 GTTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCCCATTCCCATAGGTTAGT 6530
Query 68898 TGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATA 68957
||| | ||| |||||| |||||| | || | | ||| || || |
Sbjct 6531 TGGGGTCTTACCCCATAGATCGAATTGTAACTTACCTTCAGATGCTGGAGAGCCTGGGAA 6590
Query 68958 TGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATA 69017
| |||||| || ||||| | | || | ||| || || | ||||||| ||
Sbjct 6591 AGATTCATATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCGTGGTA 6650
Query 69018 AATTGTTTCGAAAATCTTCTTATTGAGATCT-TGTGCTTCTAGACTATCGAATGGATAAT 69076
|| ||||| || || | || | |||| | ||||||| || ||||| ||
Sbjct 6651 GATAGTTTCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCGGAGTCAAATGGCAAAC 6709
Query 69077 GTAAAAGAATAAATGCATCTGCCAATCCCTGAAC-CCCAATACCGATAGGTCTATGTCTC 69135
||| | || || || || || || || ||||| |||||| | |||||||| ||||||
Sbjct 6710 GTAGCATCATGAAAGCGTCCGCTAAACCTTGAACACCCAAT-GCAATAGGTCTGTGTCTC 6768
Query 69136 TTATTTGAACTT---TCAGCTTCTGGAATAGGATAATAATTA 69174
| ||||| ||| ||| ||| || |||||||| |||
Sbjct 6769 ATGTTTGATCTTCTGGCAGTTTC---AACTGGATAATAGTTA 6807
>seq582
Length=15002
Score = 205 bits (226), Expect = 1e-47
Identities = 586/884 (66%), Gaps = 18/884 (2%)
Strand=Plus/Minus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|||||||| || || | || ||||| ||||| ||||| || |||| || || |||
Sbjct 2214 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 2155
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
||||| || || || || ||||| | || || | ||| || ||||| | |
Sbjct 2154 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 2095
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| ||| |||||||||||||| | |||| ||||||| ||| ||||| || | ||
Sbjct 2094 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 2035
Query 39506 TTAACTGGTAGAGCCTCCGT-TAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564
||| |||||||| || | || | ||| |||||||| || || || ||||| || ||
Sbjct 2034 GAAACGGGTAGAGCGTCAATGAAGTATCTC-TTTTCGATCTCAACAGCTTCTGTGATGAT 1976
Query 39565 CGATGTTACTACCTCATCA-CTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623
| || | || | || | | | | | ||||| | || | ||| ||||| |
Sbjct 1975 TCTTTCGACAATCTTTGGATCTGGCTTG-TTCTTCAAATGATGGAATAGTAAACAGGCAA 1917
Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683
|||| || | || |||||||| | ||| |||||||| || ||||| | || ||||
Sbjct 1916 AGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCA 1857
Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743
| | ||| ||| || | ||| || |||||||| || || ||||| || || | ||||
Sbjct 1856 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTT 1797
Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA---ACTTGTATCATTATGTATCCA-C 39799
| || || || || ||||| | ||| || | || | | || | | | ||||| |
Sbjct 1796 CCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAATCCATC 1737
Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858
| || ||||| | ||| || |||||| | || || ||||| || ||||| || |
Sbjct 1736 TAATG-GCCCATTGAGCCTT-TTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAA 1679
Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918
| | | || | | ||| || | || || || || |||| ||| | || ||
Sbjct 1678 GAACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCGGA 1619
Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978
|| |||||||| ||| || || || ||||| || || | ||||| | |||||| ||
Sbjct 1618 GTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCAC 1559
Query 39979 CTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAA 40038
||| | | || ||||| |||| ||||| ||||| || ||||| ||| ||||| ||
Sbjct 1558 CTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAA 1499
Query 40039 TGCCAATACATGTTTA-ATAAAATATTTTTC-ATCGGGTGTCAAT---TTATTCCAGTCA 40093
|| | || | | | || ||| || | || || || ||| | || |||||||||
Sbjct 1498 CGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGT-TCATTCTGTTGTTCCAGTCA 1441
Query 40094 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTG 40153
| || ||| || || | ||| | ||||||||| |||||||| || ||||| || | ||
Sbjct 1440 TGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTA 1381
Query 40154 TACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197
|| | ||| || || | || | ||||| |||| |||||
Sbjct 1380 TAAGCTTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1337
>seq35
Length=84627
Score = 120 bits (132), Expect = 4e-22
Identities = 342/523 (65%), Gaps = 2/523 (0%)
Strand=Plus/Plus
Query 69555 TTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATC 69614
||||| ||||| | | ||||| | |||| || | ||| |||| |||||| |||||
Sbjct 61057 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 61116
Query 69615 GGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttt 69674
|||||||| || || ||| | |||| || || ||||||| ||||| ||| ||
Sbjct 61117 CGGAATCCATAGGGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCATGATTCTT 61176
Query 69675 tttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGAC 69734
| | || | | || || ||||| ||| |||||||||||| | ||||| | | |
Sbjct 61177 TCTTAGTTGTAAGAAGTCAATAATGTCACCATGCCATGGTTCCAAGTATATACAAAAGGC 61236
Query 69735 TCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAG 69794
|| || ||||| || || || || || | ||||| || ||||| ||| | || | |||
Sbjct 61237 ACCGGGGCGTTTGTTCCCACCTTGGTCGACATATCTTGCCGTGTTGTTAAAAACCCGCAG 61296
Query 69795 CATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCG 69854
||| || | | |||||||| ||||||| | || || |||||| || |||| |
Sbjct 61297 CATAGGCACTAAGCCATTAGAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCCCT 61356
Query 69855 AATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTT 69914
||||| | | || || || || || | ||| || || | |||| |
Sbjct 61357 TATATTCGACACATGTATTCCAATACCACCAGATGCTTTCGATATCAAAGCAGTCTTGTG 61416
Query 69915 CAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGA 69974
|| || | ||| ||||| || ||| || ||| ||| | |||||| || ||
Sbjct 61417 TAAAGTCTTATAAATACCATCAATGGAGTCTTCTTCCATAGCCACAAGAAAGCATGATGA 61476
Query 69975 CATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTT 70034
|| | |||| || || || ||| || || ||||| || |||||| | || | ||
Sbjct 61477 CAAATATTGATTTACTGTACCGCTATTGAACAAAGTAGGTGAAGCGTGAATAAAATACTT 61536
Query 70035 TTCAGAAAGCAGATTG-TATGTTTCAATAGCTGATTCTATATC 70076
|| || | | |||| || || |||| ||| |||||||||
Sbjct 61537 TTGTGACATTA-ATTGATACGTCTCAAGTACTGCTTCTATATC 61578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686899389349440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |