Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq53 161 8e-35
seq582 116 3e-21
>seq53
Length=11548
Score = 161 bits (178), Expect = 8e-35
Identities = 328/481 (68%), Gaps = 16/481 (3%)
Strand=Plus/Plus
Query 19310 CAGATGTCATTAAACAATTGGGATGTAA-ACATGTTCGTGGACTTTTGCTTTATGGGCCA 19368
||| ||||||| || | ||||| | || ||| || || || ||| | | ||| ||
Sbjct 2584 CAGCTGTCATTGAAAAGTTGGG-TATATCACACGTAAAGGGTCTCTTGTTGTTTGGTCCT 2642
Query 19369 CCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---CAAAACAA 19425
|| ||| ||| ||||||||||| || ||| || | ||| | | | | | ||| ||
Sbjct 2643 CCAGGTACTGGTAAAACATTAATCGCAAGAAAAATCGGTACAATGTTGAATGCCAAAGAA 2702
Query 19426 CCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAA 19485
|| || ||||| || ||||| |||||| | | ||| ||||| || || ||||||
Sbjct 2703 CCA---AAGATTGTTAACGGTCCAGAAATCCTCAGTAAGTATGTGGGCTCTTCAGAAGAA 2759
Query 19486 AATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAG- 19544
||| | || ||||| || ||||| | |||| | ||| | |||| | | ||
Sbjct 2760 AATATCCGTAACTTGTTCAAGGATGCTGAGGCAGAATATAAA-GCCAAGGGTGAAGAATC 2818
Query 19545 TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC--- 19601
||| ||||||||||| || | ||||||||||| | | | ||||||||||||||
Sbjct 2819 TTCATTGCACATTATCATTTTCGATGAATTGGATTCTGTGTTCAAGCAAAGAGGTTCAAG 2878
Query 19602 ---TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
|| | | || || |||| ||||| |||||| | || | ||| | || ||
Sbjct 2879 AGGTGACGGCACAGGCGTTGGAGACAACGTTGTTAATCAATTGCTTGCTAAAATGGATGG 2938
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718
|||| ||||| | || ||||| || |||||||| |||||||| | ||| || || ||
Sbjct 2939 TGTTGACCAATTAAACAATATATTGGTTATTGGTATGACTAACCGTAAGGATTTGATCGA 2998
Query 19719 CAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGA 19778
|| ||||| ||||| || ||| | || ||| | || |||||||| | ||||| || ||
Sbjct 2999 TAGTGCCTTGTTACGTCCTGGTAGATTTGAAGTCCAGGTCGAAATTCAATTACCAGACGA 3058
Query 19779 A 19779
|
Sbjct 3059 A 3059
>seq582
Length=15002
Score = 116 bits (128), Expect = 3e-21
Identities = 559/867 (64%), Gaps = 40/867 (5%)
Strand=Plus/Plus
Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767
||||| | |||| || || || || ||| || || || | ||| |||| || |||||
Sbjct 1345 TTTCCCAATCAAGTACCACGAAATCTGGGAAGCTTATAAGAGAGCCGAGGCCTCTTTTTG 1404
Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCA-C 43826
||| || |||||| | |||||| | || || | | |||| || | || | |
Sbjct 1405 GACTGCTGAAGAAATCGATTTGTCCAAGGATCTCCATGACTGGAA--CAACAGAATGAAC 1462
Query 43827 AAGAA--AAACATTTTATATCTTTGGTTT--TGGCGTTTTTTGCTGCGAGCGACGGGATA 43882
|||| | | ||||| |||| | | | ||||| |||||||| ||| || ||
Sbjct 1463 GAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGCTGCTTCCGATGGTATC 1522
Query 43883 GTCAATGAAAATTTGGTTAGTCGGTT-TGCGCAAGAAGTTCAATTACCAGAAGCACGATG 43941
|| || ||||| ||||| || | ||| || || ||| | |||||||| ||
Sbjct 1523 GTGAACGAAAACTTGGTGGAAAACTTCTCCGCT-GAGGTGCAAATTCCAGAAGCCAAGTG 1581
Query 43942 TTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGAT 44001
|| || || || |||||| || ||||| ||||| || || | || | ||||
Sbjct 1582 CTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCCGAGACTTATTCGTTGTTGAT 1641
Query 44002 AGATACGTACATCAAAGATGGGCACGAGAAGCATCGA----TTGTTTAATGCGATAGAAA 44057
|| || |||||||| ||| | || |||| ||| ||||| ||||| || ||||
Sbjct 1642 TGACACTTACATCAAGGAT---CCTAAGGAGCA-CGAGTTCTTGTTGAATGCCATTGAAA 1697
Query 44058 CAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATT 44117
| | || || ||| | || || | |||||| ||| |||||| | | ||
Sbjct 1698 CCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCGTGACGACGAAG 1757
Query 44118 CTTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGAT 44174
|| | || ||| || | || ||||| || | |||||||| | || || || || |
Sbjct 1758 CTCTATATGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTT 1817
Query 44175 CGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAA 44234
| || || ||||| || ||||| ||||| ||||||||||| || ||||| || ||||
Sbjct 1818 CCTTCGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACATTCTCAA 1877
Query 44235 ATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGAT 44294
| || || || | | |||||||| || || ||| ||||| || || || || ||
Sbjct 1878 ACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTACTA-TTCCAT 1936
Query 44295 ATCTAGGAGACGATAAGCC---TTCATGTAAGACAAT-TACAGATATTGTTGTAGAGGCA 44350
| | ||| | ||||| | || |||| | | ||| || | ||| ||
Sbjct 1937 CATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTCGAAAGA-ATCATCACAGAAGCT 1990
Query 44351 GTAAAGATAGAACA-AGA-ATTT--ATGACAACAGCATTACCTGTAAATTTAATAGGAAT 44406
|| |||| ||| | ||| | || |||| || |||| || | || | || ||
Sbjct 1991 GTTGAGATCGAAAAGAGATACTTCATTGAC----GCTCTACCCGTTTCTCTATTGGGTAT 2046
Query 44407 GAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACT 44466
||| | ||||||||||||||| | |||| ||||||| | |||| | | |
Sbjct 2047 GAACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTT 2106
Query 44467 GGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTT 44526
||| | | ||| |||| | || ||||| || || ||||||||||| ||||| ||
Sbjct 2107 AGGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTT 2166
Query 44527 GGAAGGCAAAACAAACTTTTTTGAAAA 44553
|| || ||||| || || || |||||
Sbjct 2167 GGCCGGTAAAACCAATTTCTTCGAAAA 2193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397450690981480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |