Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq65 232 8e-56 >seq65 Length=9430 Score = 232 bits (256), Expect = 8e-56 Identities = 942/1468 (64%), Gaps = 35/1468 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || || |||| ||||||||||| || ||||| |||| |||||| ||||| | ||| || Sbjct 6382 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAAATTTGAGATGTAGAA 6441 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || || | | | ||| | ||||| | || | | || || Sbjct 6442 GCAGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 6501 Query 118302 TTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTG-TCTCCCCCTGCCACATATCAAACTGG 118358 || | ||||| || ||| | || | | ||| ||| || | ||| || || Sbjct 6502 TTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACCC---CATAGATCGAATTGT 6558 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 | |||||| || ||||| || || || | |||||||| || || ||| ||| Sbjct 6559 AACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCC 6618 Query 118419 AATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 ||||| |||| || || || |||| || || |||||||| || | | ||| Sbjct 6619 AATTCCATGGAG---GCTTCACAAGCACCGTGGTAGATAGTTTCAAAGATTTGGACGTTC 6675 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | | ||| || || ||||| ||||| | | || || || || | ||||| | | Sbjct 6676 AATCTCTTTGCTTCTTCGGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCCGCTAAA 6735 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCTCCAC 118594 ||||| ||||| | |||| || | |||||||| || || |||| | || || || || Sbjct 6736 CCTTGAACACCCAATGCAATAGGTCTGTGTCTCATGTTTGATCTTCTG-GCAGTTTCAAC 6794 Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654 |||||| | || | || || | || || | || ||| | |||||| | ||| || Sbjct 6795 TGGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGGGTCAAAACCTTAGAGATATC 6854 Query 118655 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG- 118709 ||| | ||||| | | | | | |||||| ||| | ||| || | ||| | Sbjct 6855 ATGCAACTTTTTGAAGTTGTACGTTTGAGTCTTACCATCGCTTGATAGTTCAATGAACGC 6914 Query 118710 -------GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 118762 || || || |||| ||||| |||| ||| || || | || ||| || | Sbjct 6915 TGGCAAAGCAATAGAAGCCAAGTTACAGACAGCGGTTTCCTCTGGGTTAGAGTATTCGAC 6974 Query 118763 AATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 118822 ||||| |||||||| ||| ||| || || ||||||||||||||||| ||| | Sbjct 6975 GATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTT 7034 Query 118823 GTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 118882 |||||| ||||| ||||| |||||| |||| || || || || ||||| | | | || Sbjct 7035 GTTACAAGCATCTTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGAT 7094 Query 118883 AGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 ||| | ||| | | ||| ||||| | | || || ||| |||||| Sbjct 7095 AGCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACG 7154 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 119002 | ||| | |||||||| || ||||| | |||| || |||||||| | || ||| Sbjct 7155 TTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAGGCCTGGTGCTTCATTTGG 7214 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 |||| | || ||| | | || || || | ||||||||| || ||||||||||| Sbjct 7215 AGAGAACAAAGTCCAATCTTCGTTCTTTTCGACTCTCTTCATGAAAAGATCTGGGATCCA 7274 Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 || || | ||| | || | || |||||| | || || || | | || Sbjct 7275 TAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTC 7334 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTAC 119181 | ||||| | |||||| | |||||| || || | ||||| |||| | ||| | Sbjct 7335 GACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCT 7394 Query 119182 GACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239 | |||| | |||| || || | |||||| ||| || ||||||| ||||||||| Sbjct 7395 CTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAAT 7454 Query 119240 GATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTG 119299 ||||| | || || || || || ||| ||| | | | | | ||| Sbjct 7455 AATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTG 7514 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 ||||||| ||||||||| || || ||| ||||| || || ||| | | | || | Sbjct 7515 AATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTC 7574 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 ||| || || || ||||| || |||| | || | ||||| || |||||||| || Sbjct 7575 GTAAATACCTTCAATCGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGG 7634 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGACA 119478 || |||||||| ||||| || ||||| | ||||| |||| || ||| | |||| Sbjct 7635 ATGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAA-GTATCTTAGAGACA 7693 Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538 | || ||| || ||||| || ||| ||| ||||| ||||||| | || | Sbjct 7694 TTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTC 7753 Query 119539 GCATAAACATGTATTG-GGGTGTTTCCATC-AGGATACCATCGAGCCTCTGGAGGTAACT 119596 ||| | ||||| ||| ||| ||| || | | |||| | || || | | |||| Sbjct 7754 TCATGATCATGTGTTGAGGGCGTT--CAGCAACCTTACCGTTGATTCTTAGCAAGTAAGA 7811 Query 119597 CTTCTCCAAGGTCTTGAGACCAAAATAG 119624 ||||||||||||| ||| || ||| Sbjct 7812 ACGTTCCAAGGTCTTGAAACCGAAGTAG 7839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618426727437760