Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq65 163 3e-35
>seq65
Length=9430
Score = 163 bits (180), Expect = 3e-35
Identities = 497/758 (66%), Gaps = 10/758 (1%)
Strand=Plus/Plus
Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116
|| |||| ||| || || || || || || ||| |||| |||| |||||| |||
Sbjct 6928 GAAGCCAAGTTACAGACAGCGGTTTCCTCTGGGTTAGAGTATTCGACGATTTCACAACAC 6987
Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176
|| || || |||||||| || || | |||||| || || ||||||| |||||| || ||
Sbjct 6988 AAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCT 7047
Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA-CTCTTGAGAACGCCGTCCCAGAT 79235
||||| |||| | || || || || || ||| || ||| || || ||| |
Sbjct 7048 TTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGC-GTACCACAA 7106
Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTA-CGTCCGGTACAA 79292
| | ||| |||| ||| | |||| | || | | |||| ||| || |||||
Sbjct 7107 CTTTTGAGCCTTGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAACGTTCG-TACAA 7163
Query 79293 CTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAG 79352
| | || | || || || ||||| || ||||| || || | || | | ||
Sbjct 7164 TGCTTCAAATTCATCACCGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAA 7223
Query 79353 GTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT 79412
||| || |||| ||| || || ||| |||||| || || |||||||| || || |
Sbjct 7224 AGTCCAATCTTCGTTCTTTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGG 7283
Query 79413 GAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTC 79472
||| | ||| | ||| || || || | || |||||| | | |||| |||||
Sbjct 7284 GAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTC 7343
Query 79473 CATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCC 79532
| ||| || | |||||| ||||| | || | |||||| | ||| | |||| ||
Sbjct 7344 GAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACC 7403
Query 79533 GCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTC 79592
|| |||| ||||| || || |||||||||||||| || | ||| || | || ||||
Sbjct 7404 ACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTT 7463
Query 79593 GGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGA 79651
| ||||| || || || | |||| | | |||||||| | | | ||| |
Sbjct 7464 AGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTT-GTGAATGTGCA 7522
Query 79652 TTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGC 79711
|| || || || | ||| ||||| || || ||||| | || ||||| || |
Sbjct 7523 AACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATAC 7582
Query 79712 CCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCG 79771
| || ||||| || |||||||| || || ||||| || ||||| ||||| | |
Sbjct 7583 CTTCAATCGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAG 7642
Query 79772 TACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809
|||| || ||||| || || |||| ||||| ||||||
Sbjct 7643 TACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAG 7680
Score = 138 bits (152), Expect = 1e-27
Identities = 489/756 (65%), Gaps = 6/756 (1%)
Strand=Plus/Minus
Query 19195 CTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAG 19254
|||||| ||||| |||| || |||||||| || ||||| | || || |||||
Sbjct 7680 CTTCACACACGCTTCGCCAACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATC 7621
Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314
|||||||||||||| |||||||| || ||||| || || ||||| || | |||||
Sbjct 7620 ATGTTTCCTAGTGGCCATGAAGGAAGATTCGATTGAAGGTATTTACGACACTTTGAAGGA 7561
Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGT 19373
|| || ||||| ||| | || ||||| || | ||| | | | || || || |
Sbjct 7560 ATGTGCCATGATCTCTAAGACCGCTGGTGGTATTGGTTTGCACATTCAC-AACATTCGTT 7502
Query 19374 CGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCC 19433
| | ||| | || ||| || ||||| | ||||||| | |||||| | |
Sbjct 7501 CTACCGGTTCTTACATTGCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTC 7442
Query 19434 GCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGT 19493
| || ||||||||||| || | ||||| |||| || || ||| | || | |
Sbjct 7441 GTGTTTTCAACAACACTGCTCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCT 7382
Query 19494 TCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGA 19553
||||| | ||| |||||||||||||| | || || | || ||| |||| | | ||
Sbjct 7381 TCGCCTTGTACATCGAGCCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGA 7322
Query 19554 ACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACC 19613
|||| ||| | || || || || | ||| | ||| | || | ||||| || || |
Sbjct 7321 ACCACGGTAAGGAAGAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATC 7262
Query 19614 TATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCC 19673
| |||||| ||| || || ||| ||||||| ||| || | | || | ||| |
Sbjct 7261 TTTTCATGAAGAGAGTCGAAAAGAACGAAGATTGGACTTTGTTCTCTCCAAATGAAGCAC 7202
Query 19674 CTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGAC-TTACGTAGCC 19732
| |||||||| || || ||||| || | || | | ||||| || || |||||
Sbjct 7201 CAGGCCTACCAGATGTTTACGGTGATGAATTTGAAGCATTGTA-CGAACGTTACGAGAGA 7143
Query 19733 CAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGC 19792
| ||||| | ||| ||| ||| | | | ||| | ||| || ||||
Sbjct 7142 GAAGGCCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTA-CGCTATCTTGGAAGC 7084
Query 19793 -CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAA 19851
|| ||| || || || || | |||| ||||| || || ||| ||| ||
Sbjct 7083 TCAAACCGAAACTGGTACCCCATTCATGCTATACAAAGATGCTTGTAACAAGAAGAGTAA 7024
Query 19852 TCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTC 19911
||| |||||| | || | |||||||| || ||| ||||| ||||||| | || ||
Sbjct 7023 TCAAAAGAACTTGGGTACTATCAAGTCTTCGAACTTGTGTTGTGAAATCGTCGAATACTC 6964
Query 19912 CAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947
|| || || || || || || ||||| |||| ||
Sbjct 6963 TAACCCAGAGGAAACCGCTGTCTGTAACTTGGCTTC 6928
Score = 93.3 bits (102), Expect = 5e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|||| | ||||||||| || ||||| | |||||||||||||||||| | |||||
Sbjct 6034 GTTCTTAGATAGTACATACCGGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAA 6093
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| || ||| ||| | | || ||| ||||| | ||| ||||| || ||||||
Sbjct 6094 GTCAACTTACCCATAGTTGGAGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATG 6153
Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369
|| ||| | ||||| || ||||| ||||| | |||||||| || ||||| | |||
Sbjct 6154 TAAGCAGCACGGTCAGCGGCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTC 6213
Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGT 78400
||| | | || ||||||| ||||||
Sbjct 6214 TTGTATAAATCTTTTAGCTCTTGTGGGATGT 6244
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 20606 ATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATC 20665
||||| || | || || || | |||| ||| || |||||||| | || ||| |||
Sbjct 6242 ATCCCACAAGAGCTAAAAGATTTATACAAGACTGTTTGGGAAATATCGCAAAAGCACATT 6183
Query 20666 ATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTC 20725
||||| ||||| || || || | || |||||||| || ||||| ||| | || | |
Sbjct 6182 ATCGATATGGCCGCTGACCGTGCTGCTTACATCGATCAATCCCAATCGTTGAACATTCAC 6123
Query 20726 ATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGG 20785
|| ||| | ||| ||| ||| ||||||||| | ||||| ||| | |||||
Sbjct 6122 ATTCGTGCTCCAACTATGGGTAAGTTGACTTCCATGCATTTCTACGGATGGAAGAAGGGT 6063
Query 20786 CTCAAGACGGGCATGTACTATCT 20808
| ||||| || |||||||||||
Sbjct 6062 TTGAAGACCGGTATGTACTATCT 6040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548517285210240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |