Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq65 163 3e-35 >seq65 Length=9430 Score = 163 bits (180), Expect = 3e-35 Identities = 497/758 (66%), Gaps = 10/758 (1%) Strand=Plus/Plus Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116 || |||| ||| || || || || || || ||| |||| |||| |||||| ||| Sbjct 6928 GAAGCCAAGTTACAGACAGCGGTTTCCTCTGGGTTAGAGTATTCGACGATTTCACAACAC 6987 Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176 || || || |||||||| || || | |||||| || || ||||||| |||||| || || Sbjct 6988 AAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCT 7047 Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA-CTCTTGAGAACGCCGTCCCAGAT 79235 ||||| |||| | || || || || || ||| || ||| || || ||| | Sbjct 7048 TTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGC-GTACCACAA 7106 Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTA-CGTCCGGTACAA 79292 | | ||| |||| ||| | |||| | || | | |||| ||| || ||||| Sbjct 7107 CTTTTGAGCCTTGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAACGTTCG-TACAA 7163 Query 79293 CTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAG 79352 | | || | || || || ||||| || ||||| || || | || | | || Sbjct 7164 TGCTTCAAATTCATCACCGTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAA 7223 Query 79353 GTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT 79412 ||| || |||| ||| || || ||| |||||| || || |||||||| || || | Sbjct 7224 AGTCCAATCTTCGTTCTTTTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGG 7283 Query 79413 GAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTC 79472 ||| | ||| | ||| || || || | || |||||| | | |||| ||||| Sbjct 7284 GAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTC 7343 Query 79473 CATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCC 79532 | ||| || | |||||| ||||| | || | |||||| | ||| | |||| || Sbjct 7344 GAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACC 7403 Query 79533 GCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTC 79592 || |||| ||||| || || |||||||||||||| || | ||| || | || |||| Sbjct 7404 ACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTT 7463 Query 79593 GGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGA 79651 | ||||| || || || | |||| | | |||||||| | | | ||| | Sbjct 7464 AGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTT-GTGAATGTGCA 7522 Query 79652 TTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGC 79711 || || || || | ||| ||||| || || ||||| | || ||||| || | Sbjct 7523 AACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATAC 7582 Query 79712 CCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCG 79771 | || ||||| || |||||||| || || ||||| || ||||| ||||| | | Sbjct 7583 CTTCAATCGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAG 7642 Query 79772 TACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809 |||| || ||||| || || |||| ||||| |||||| Sbjct 7643 TACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAG 7680 Score = 138 bits (152), Expect = 1e-27 Identities = 489/756 (65%), Gaps = 6/756 (1%) Strand=Plus/Minus Query 19195 CTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAG 19254 |||||| ||||| |||| || |||||||| || ||||| | || || ||||| Sbjct 7680 CTTCACACACGCTTCGCCAACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATC 7621 Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314 |||||||||||||| |||||||| || ||||| || || ||||| || | ||||| Sbjct 7620 ATGTTTCCTAGTGGCCATGAAGGAAGATTCGATTGAAGGTATTTACGACACTTTGAAGGA 7561 Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGT 19373 || || ||||| ||| | || ||||| || | ||| | | | || || || | Sbjct 7560 ATGTGCCATGATCTCTAAGACCGCTGGTGGTATTGGTTTGCACATTCAC-AACATTCGTT 7502 Query 19374 CGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCC 19433 | | ||| | || ||| || ||||| | ||||||| | |||||| | | Sbjct 7501 CTACCGGTTCTTACATTGCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTC 7442 Query 19434 GCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGT 19493 | || ||||||||||| || | ||||| |||| || || ||| | || | | Sbjct 7441 GTGTTTTCAACAACACTGCTCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCT 7382 Query 19494 TCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGA 19553 ||||| | ||| |||||||||||||| | || || | || ||| |||| | | || Sbjct 7381 TCGCCTTGTACATCGAGCCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGA 7322 Query 19554 ACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACC 19613 |||| ||| | || || || || | ||| | ||| | || | ||||| || || | Sbjct 7321 ACCACGGTAAGGAAGAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATC 7262 Query 19614 TATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCC 19673 | |||||| ||| || || ||| ||||||| ||| || | | || | ||| | Sbjct 7261 TTTTCATGAAGAGAGTCGAAAAGAACGAAGATTGGACTTTGTTCTCTCCAAATGAAGCAC 7202 Query 19674 CTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGAC-TTACGTAGCC 19732 | |||||||| || || ||||| || | || | | ||||| || || ||||| Sbjct 7201 CAGGCCTACCAGATGTTTACGGTGATGAATTTGAAGCATTGTA-CGAACGTTACGAGAGA 7143 Query 19733 CAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGC 19792 | ||||| | ||| ||| ||| | | | ||| | ||| || |||| Sbjct 7142 GAAGGCCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTA-CGCTATCTTGGAAGC 7084 Query 19793 -CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAA 19851 || ||| || || || || | |||| ||||| || || ||| ||| || Sbjct 7083 TCAAACCGAAACTGGTACCCCATTCATGCTATACAAAGATGCTTGTAACAAGAAGAGTAA 7024 Query 19852 TCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTC 19911 ||| |||||| | || | |||||||| || ||| ||||| ||||||| | || || Sbjct 7023 TCAAAAGAACTTGGGTACTATCAAGTCTTCGAACTTGTGTTGTGAAATCGTCGAATACTC 6964 Query 19912 CAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947 || || || || || || || ||||| |||| || Sbjct 6963 TAACCCAGAGGAAACCGCTGTCTGTAACTTGGCTTC 6928 Score = 93.3 bits (102), Expect = 5e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 |||| | ||||||||| || ||||| | |||||||||||||||||| | ||||| Sbjct 6034 GTTCTTAGATAGTACATACCGGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAA 6093 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | || ||| ||| | | || ||| ||||| | ||| ||||| || |||||| Sbjct 6094 GTCAACTTACCCATAGTTGGAGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATG 6153 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 || ||| | ||||| || ||||| ||||| | |||||||| || ||||| | ||| Sbjct 6154 TAAGCAGCACGGTCAGCGGCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTC 6213 Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGT 78400 ||| | | || ||||||| |||||| Sbjct 6214 TTGTATAAATCTTTTAGCTCTTGTGGGATGT 6244 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20606 ATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATC 20665 ||||| || | || || || | |||| ||| || |||||||| | || ||| ||| Sbjct 6242 ATCCCACAAGAGCTAAAAGATTTATACAAGACTGTTTGGGAAATATCGCAAAAGCACATT 6183 Query 20666 ATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTC 20725 ||||| ||||| || || || | || |||||||| || ||||| ||| | || | | Sbjct 6182 ATCGATATGGCCGCTGACCGTGCTGCTTACATCGATCAATCCCAATCGTTGAACATTCAC 6123 Query 20726 ATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGG 20785 || ||| | ||| ||| ||| ||||||||| | ||||| ||| | ||||| Sbjct 6122 ATTCGTGCTCCAACTATGGGTAAGTTGACTTCCATGCATTTCTACGGATGGAAGAAGGGT 6063 Query 20786 CTCAAGACGGGCATGTACTATCT 20808 | ||||| || ||||||||||| Sbjct 6062 TTGAAGACCGGTATGTACTATCT 6040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548517285210240