Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq65 161 1e-34 >seq65 Length=9430 Score = 161 bits (178), Expect = 1e-34 Identities = 364/542 (67%), Gaps = 4/542 (1%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 || || ||| || ||||| | || ||||| || ||||| ||||||| || ||||| Sbjct 7709 GAAACTTACAACCTAATGTCTCTAAGATACTTCACACACGCTTCGCCAACACTTTTCAAT 7650 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 |||||||| ||| || || ||||| || ||||| ||||| |||||||| || ||| Sbjct 7649 GCTGGTACTCCTCATCCACAAATGTCATCATGTTTCCTAGTGGCCATGAAGGAAGATTCG 7590 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || || || ||||| || | ||||| |||||| ||||| ||| | |||||| Sbjct 7589 ATTGAAGGTATTTACGACACTTTGAAGGAATGTGCCATGATCTCTAAGACCGCTGGTGGT 7530 Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| | ||| | | | ||| | ||| | | ||| | || || || ||||| Sbjct 7529 ATTGGTTTGCACATTCAC-AACATTCGTTCTACCGGTTCTTACATTGCTGGTACTAACGG 7471 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | || || | || ||| | || || ||||||||||| || || ||||| | Sbjct 7470 TACTTCTAACGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCTCGTTACGTTGA 7411 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 ||| |||||| ||| | || | |||||| | ||| ||||||| |||||| | || Sbjct 7410 CCAAGGTGGTAACAAGAGACCTGGTGCCTTCGCCTTGTACATCGAGCCATGGCACTCAGA 7351 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 || | || || |||| | | ||| || ||| | ||||| || || ||| | | Sbjct 7350 TATCTTCGACTTCGTCGACATCAGAAAGAACCACGGTAAGGAAGAAATCCG-TGCAAGAG 7292 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 || |||| |||| || ||||| || || || |||||| | | || || ||| |||| | Sbjct 7291 ACTTGTTCCCAGCACTATGGATCCCAGATCTTTTCATGAAGAGAGTCGAAAAGAACGAAG 7232 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || | | || || || || ||||| | | ||| |||||||| || | Sbjct 7231 ATTGGACTTTGTTCTCTCCAAATGAAGCACCAGGCCTACCAGATGTTTACGGTGATGAAT 7172 Query 53781 TT 53782 || Sbjct 7171 TT 7170 Score = 89.7 bits (98), Expect = 6e-13 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 55734 AGATTTA--CCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGA 55791 ||||||| | ||| || ||||| || | || ||| | || || ||| ||||| Sbjct 6225 AGATTTATACAAGACTGTTTGGGAAATATCGCAAAAGCACATTATCGATATGGCCGCTGA 6166 Query 55792 TCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACT 55851 |||| ||| |||||||| || ||||| || ||||||| ||| ||| | | Sbjct 6165 CCGTGCTGCTTACATCGATCAATCCCAATCGTTGAACATTCACATTCGTGCTCCAACTAT 6106 Query 55852 GGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTA 55911 || ||||||| || ||||| || ||||| ||||||||||| | ||||| |||||||| Sbjct 6105 GGGTAAGTTGACTTCCATGCATTTCTACGGATGGAAGAAGGGTTTGAAGACCGGTATGTA 6046 Query 55912 CTATCT 55917 |||||| Sbjct 6045 CTATCT 6040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547208503140800