Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq493 141 1e-28 seq65 127 2e-24 seq689 123 3e-23 >seq493 Length=23338 Score = 141 bits (156), Expect = 1e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || || || ||||||||||| | || || || || Sbjct 23126 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 23185 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||| |||| || || |||||||| || |||||||||||||| Sbjct 23186 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 23245 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || |||| | | || | | ||||| || Sbjct 23246 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 23305 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||| || ||||| | |||||| Sbjct 23306 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTG 23338 >seq65 Length=9430 Score = 127 bits (140), Expect = 2e-24 Identities = 523/814 (64%), Gaps = 18/814 (2%) Strand=Plus/Plus Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009 ||||||||||| ||||| || |||||||| || ||||||| ||| || || || | Sbjct 6970 TCGACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTC 7029 Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069 || ||| ||||| || ||||| |||| | |||||||| || ||| || | | Sbjct 7030 TTCTTGTTACAAGCATCTTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCC 7089 Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129 | ||| |||| ||| | || | |||||||| ||| | |||||| | | Sbjct 7090 AAGATAGCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCG 7149 Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189 || |||| | | || || | |||||| || || | ||| |||| || Sbjct 7150 TAACGTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAGGCCTGGTGCTTCA 7209 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249 || || | | || ||| || || || || || |||||||||| || ||| Sbjct 7210 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTTTCGACTCTCTTCATGAAAAGATCTGGG 7269 Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308 ||||| || || | ||||| ||| | ||| || || || | ||| ||||| | Sbjct 7270 ATCCATAGTGCTGGGAACAAGTCTCTTGCA-CGGATTTCTTCCTTACCGTGGTTCTTTCT 7328 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC- 81366 | |||| ||||| | ||| || | ||||||||||| | |||| ||||| | || Sbjct 7329 GATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACC 7388 Query 81367 ----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422 | |||| | ||||| |||| |||||||| ||||| ||| || ||||| | Sbjct 7389 AGGTCTCTTGTTA---CCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAAT 7445 Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482 ||| || || ||||| | || |||||| ||||| | || || || | | || Sbjct 7446 CATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACG 7505 Query 81483 CACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541 | ||| ||| || | ||| || ||||| | ||| || ||| ||||| | Sbjct 7506 AATGTTG-TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCT 7564 Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601 ||| || || ||||| || || || ||||| |||||| | | | |||||| || Sbjct 7565 TCAAAGTGTCGTAAATACCTTCAATCGAATCTTCCTTCATGGCCACTAGGAAACATGATG 7624 Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659 |||| || || | ||| || |||||||| |||||||| | ||||| |||| || Sbjct 7625 ACATTTGTGG--ATGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTA 7682 Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719 | ||||| |||| || |||||| || | |||||| |||||| ||||| Sbjct 7683 TCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACC 7742 Query 81720 GATAGCTACACGCATAAACATGTACTG-GGGCGT 81752 || ||| || | ||| | ||||| || |||||| Sbjct 7743 GACAGCCACTCTCATGATCATGTGTTGAGGGCGT 7776 >seq689 Length=43288 Score = 123 bits (136), Expect = 3e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| | || || ||||| || ||| | || || || || ||| | |||| Sbjct 11237 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATT 11296 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| |||||||| || ||||| |||||||| || | | Sbjct 11297 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTG 11356 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | || | | ||||| || |||||||| Sbjct 11357 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAG 11416 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||| ||||| | |||||| | || | ||||| Sbjct 11417 GAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGG 11454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570302586747520