Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq493 141 1e-28
seq65 127 2e-24
seq689 123 3e-23
>seq493
Length=23338
Score = 141 bits (156), Expect = 1e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || || ||||||||||| | || || || ||
Sbjct 23126 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 23185
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| |||| || || |||||||| || ||||||||||||||
Sbjct 23186 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 23245
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | | || | | ||||| ||
Sbjct 23246 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 23305
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| || ||||| | ||||||
Sbjct 23306 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTG 23338
>seq65
Length=9430
Score = 127 bits (140), Expect = 2e-24
Identities = 523/814 (64%), Gaps = 18/814 (2%)
Strand=Plus/Plus
Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009
||||||||||| ||||| || |||||||| || ||||||| ||| || || || |
Sbjct 6970 TCGACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTC 7029
Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069
|| ||| ||||| || ||||| |||| | |||||||| || ||| || | |
Sbjct 7030 TTCTTGTTACAAGCATCTTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCC 7089
Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129
| ||| |||| ||| | || | |||||||| ||| | |||||| | |
Sbjct 7090 AAGATAGCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCG 7149
Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189
|| |||| | | || || | |||||| || || | ||| |||| ||
Sbjct 7150 TAACGTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAGGCCTGGTGCTTCA 7209
Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249
|| || | | || ||| || || || || || |||||||||| || |||
Sbjct 7210 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTTTCGACTCTCTTCATGAAAAGATCTGGG 7269
Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308
||||| || || | ||||| ||| | ||| || || || | ||| ||||| |
Sbjct 7270 ATCCATAGTGCTGGGAACAAGTCTCTTGCA-CGGATTTCTTCCTTACCGTGGTTCTTTCT 7328
Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC- 81366
| |||| ||||| | ||| || | ||||||||||| | |||| ||||| | ||
Sbjct 7329 GATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACC 7388
Query 81367 ----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422
| |||| | ||||| |||| |||||||| ||||| ||| || ||||| |
Sbjct 7389 AGGTCTCTTGTTA---CCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAAT 7445
Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482
||| || || ||||| | || |||||| ||||| | || || || | | ||
Sbjct 7446 CATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACG 7505
Query 81483 CACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541
| ||| ||| || | ||| || ||||| | ||| || ||| ||||| |
Sbjct 7506 AATGTTG-TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCT 7564
Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601
||| || || ||||| || || || ||||| |||||| | | | |||||| ||
Sbjct 7565 TCAAAGTGTCGTAAATACCTTCAATCGAATCTTCCTTCATGGCCACTAGGAAACATGATG 7624
Query 81602 ACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659
|||| || || | ||| || |||||||| |||||||| | ||||| |||| ||
Sbjct 7625 ACATTTGTGG--ATGAGGAGTACCAGCATTGAAAAGTGTTGGCGAAGCGTGTGTGAAGTA 7682
Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719
| ||||| |||| || |||||| || | |||||| |||||| |||||
Sbjct 7683 TCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACC 7742
Query 81720 GATAGCTACACGCATAAACATGTACTG-GGGCGT 81752
|| ||| || | ||| | ||||| || ||||||
Sbjct 7743 GACAGCCACTCTCATGATCATGTGTTGAGGGCGT 7776
>seq689
Length=43288
Score = 123 bits (136), Expect = 3e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| | || || ||||| || ||| | || || || || ||| | ||||
Sbjct 11237 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATT 11296
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || ||||| |||||||| || | |
Sbjct 11297 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTG 11356
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | || | | ||||| || ||||||||
Sbjct 11357 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAG 11416
Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||| ||||| | |||||| | || | |||||
Sbjct 11417 GAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGG 11454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570302586747520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |