Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1062 87.8 1e-12 >seq1062 Length=20682 Score = 87.8 bits (96), Expect = 1e-12 Identities = 215/319 (67%), Gaps = 14/319 (4%) Strand=Plus/Plus Query 30058 GCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117 ||| || ||||||||| | | | ||||| || ||||||||||| || || Sbjct 8251 GCTGACATAAAACTGAGAGAACACATGGCATGGTGGAAGAGCCATTTTTGGGAAATCAGG 8310 Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTC-----CTGATGAGG 30172 |||||||| || ||| ||| || | || || | || |||||| || |||| Sbjct 8311 AGGGTTCCATGCCGACATGATAATCCTTCTATCATAAGGATTGTTCTTCAACTTATGAAT 8370 Query 30173 TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGT 30231 ||| || || | |||||| || || || || || || | | |||||| | Sbjct 8371 --CACATCGCTT---AACTGATCGACACCTTGTCCTGAATAATCATCGTCACATGTCT-T 8424 Query 30232 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30291 ||| |||||||||||||||||||| |||||||| || || ||||||| || ||||| Sbjct 8425 GTATTCTGCTCCGAAATGCCTCCATTGGAACCCATAAACAGGTCCCAAATCACCCTCACG 8484 Query 30292 CCTGTGCTCGAAG-CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 30350 || | || ||| ||| |||||| | || | ||| ||||| | |||||||||| Sbjct 8485 TCTAT-CTGTAAGTCCCAAGGAGTCCAAGTACTCACGGGATCCGTTCCCTTCCCAGATCT 8543 Query 30351 TTACCCCCTTCTCAGAGAG 30369 | || || | |||||||| Sbjct 8544 TCACACCTTGATCAGAGAG 8562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406304972708832