Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq1062 87.8 1e-12
>seq1062
Length=20682
Score = 87.8 bits (96), Expect = 1e-12
Identities = 215/319 (67%), Gaps = 14/319 (4%)
Strand=Plus/Plus
Query 30058 GCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117
||| || ||||||||| | | | ||||| || ||||||||||| || ||
Sbjct 8251 GCTGACATAAAACTGAGAGAACACATGGCATGGTGGAAGAGCCATTTTTGGGAAATCAGG 8310
Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTC-----CTGATGAGG 30172
|||||||| || ||| ||| || | || || | || |||||| || ||||
Sbjct 8311 AGGGTTCCATGCCGACATGATAATCCTTCTATCATAAGGATTGTTCTTCAACTTATGAAT 8370
Query 30173 TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGT 30231
||| || || | |||||| || || || || || || | | |||||| |
Sbjct 8371 --CACATCGCTT---AACTGATCGACACCTTGTCCTGAATAATCATCGTCACATGTCT-T 8424
Query 30232 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30291
||| |||||||||||||||||||| |||||||| || || ||||||| || |||||
Sbjct 8425 GTATTCTGCTCCGAAATGCCTCCATTGGAACCCATAAACAGGTCCCAAATCACCCTCACG 8484
Query 30292 CCTGTGCTCGAAG-CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 30350
|| | || ||| ||| |||||| | || | ||| ||||| | ||||||||||
Sbjct 8485 TCTAT-CTGTAAGTCCCAAGGAGTCCAAGTACTCACGGGATCCGTTCCCTTCCCAGATCT 8543
Query 30351 TTACCCCCTTCTCAGAGAG 30369
| || || | ||||||||
Sbjct 8544 TCACACCTTGATCAGAGAG 8562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406304972708832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |