Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq689 170 5e-37
seq493 159 8e-34
seq266 91.5 4e-13
>seq689
Length=43288
Score = 170 bits (188), Expect = 5e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||||| ||| | ||| || |||||||| ||||||| ||||| || | |||||||||
Sbjct 11445 AGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTA 11386
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| ||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||
Sbjct 11385 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 11326
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| ||||| ||| ||| || |||||||| || | ||| || || || |||
Sbjct 11325 TTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTG 11266
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| ||||| || ||||| || || | |||
Sbjct 11265 ATGGTCTTACCAGTCAAGGTCTTGACGAA 11237
>seq493
Length=23338
Score = 159 bits (176), Expect = 8e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|| ||| | ||| || || ||||| ||||||| ||||| || | ||||||||| |||||
Sbjct 23338 CAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATC 23279
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| | ||||| ||||| ||||| | || ||||||||| || |||||||||||||||||
Sbjct 23278 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 23219
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| ||| || |||||||| || | ||| || || || || || ||
Sbjct 23218 TTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGT 23159
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || || | || || | ||| | ||||||
Sbjct 23158 CTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 23126
>seq266
Length=13047
Score = 91.5 bits (100), Expect = 4e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || ||||| || || || |||||||| |||||||||||
Sbjct 1430 GAAAATTTGACCATCGGTAATGGAAATAACGTTGGTTGGAATATAAGCGGAAACATCACC 1371
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| ||||||| || || || || || | || ||||||||
Sbjct 1370 ACCTTGGGTTTCGATGACTGGCAAAGCGGTCAAAGAACCACCACC 1326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192514453880624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |