Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq582 217 1e-51
>seq582
Length=15002
Score = 217 bits (240), Expect = 1e-51
Identities = 573/853 (67%), Gaps = 19/853 (2%)
Strand=Plus/Minus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| |||||||| || || |||| ||||||||||||||| ||||| || | ||
Sbjct 2223 ACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAG 2164
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAG 4366
||||| ||||||||||| || || || ||||| ||||||| | ||| || || | |
Sbjct 2163 GAAATGTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAA- 2105
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
||| || || | || ||| || |||||||| | || ||| |||| | || ||| ||
Sbjct 2104 AGCAACCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCAT 2045
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTT 4485
|| | || || ||||| |||| | || | ||||| ||| || || ||||
Sbjct 2044 ACCCAATAGAGAAACGGGTAGAGCGTCAATGAAGTATCTCTT-TTCGATCTCAACAGCTT 1986
Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATT-TACTAAGTATCCAAACA 4542
||||||| || ||||| |||||| ||| || || || | | || || || |
Sbjct 1985 CTGTGATGAT-TCTTTCGACA-ATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAAT-A 1929
Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602
|||||| ||||| || ||||||||||| ||||||| ||||| |||||| || || |
Sbjct 1928 GTAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATG 1869
Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662
| || || ||||| ||||| |||| || | ||| || || || || || || ||||| |
Sbjct 1868 TCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGA 1809
Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATC-GGGACCCGAACGAGCTGGCTTTG 4721
| || | ||||| ||||| || ||||| || |||| | | | ||||| | | |
Sbjct 1808 AAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCT-TCGTCG 1750
Query 4722 TCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATA 4781
|| ||||||| | | ||||| | ||| |||| || | ||||| || | ||
Sbjct 1749 TCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATG 1690
Query 4782 GCGTTAAATAATTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840
|| || || || ||| | || || || | || |||||||| || | |
Sbjct 1689 GCATTCAACAA-GAACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGA 1631
Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900
||| | || || || || ||||| || ||| || || ||||| ||||| | |||||
Sbjct 1630 ATAAGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTC 1571
Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960
|| | ||| || || | || |||| || ||||||||||| || ||||| ||
Sbjct 1570 TGGAATTTGCACCTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGA 1511
Query 4961 GGCTGCAAAAAACGCCA--AAACATGAGAT-ATAAAGTACT-GTTCGTCAGGCTTAAGTT 5016
|| ||||| ||||| | | | ||||| | ||| || |||| || | | |
Sbjct 1510 AGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTGT 1452
Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076
| ||||||| | | ||| || | ||||| | ||||||| |||||||||| || || |
Sbjct 1451 TGTTCCAGTCATGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCT 1392
Query 5077 CCGCTTTTTTGTA 5089
| ||| | || ||
Sbjct 1391 CGGCTCTCTTATA 1379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427043895684968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |