Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq582 217 1e-51 >seq582 Length=15002 Score = 217 bits (240), Expect = 1e-51 Identities = 573/853 (67%), Gaps = 19/853 (2%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| || || |||| ||||||||||||||| ||||| || | || Sbjct 2223 ACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAG 2164 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAG 4366 ||||| ||||||||||| || || || ||||| ||||||| | ||| || || | | Sbjct 2163 GAAATGTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAA- 2105 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || || | || ||| || |||||||| | || ||| |||| | || ||| || Sbjct 2104 AGCAACCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCAT 2045 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTT 4485 || | || || ||||| |||| | || | ||||| ||| || || |||| Sbjct 2044 ACCCAATAGAGAAACGGGTAGAGCGTCAATGAAGTATCTCTT-TTCGATCTCAACAGCTT 1986 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATT-TACTAAGTATCCAAACA 4542 ||||||| || ||||| |||||| ||| || || || | | || || || | Sbjct 1985 CTGTGATGAT-TCTTTCGACA-ATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAAT-A 1929 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 |||||| ||||| || ||||||||||| ||||||| ||||| |||||| || || | Sbjct 1928 GTAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATG 1869 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 | || || ||||| ||||| |||| || | ||| || || || || || || ||||| | Sbjct 1868 TCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGA 1809 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATC-GGGACCCGAACGAGCTGGCTTTG 4721 | || | ||||| ||||| || ||||| || |||| | | | ||||| | | | Sbjct 1808 AAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCT-TCGTCG 1750 Query 4722 TCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATA 4781 || ||||||| | | ||||| | ||| |||| || | ||||| || | || Sbjct 1749 TCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATG 1690 Query 4782 GCGTTAAATAATTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 || || || || ||| | || || || | || |||||||| || | | Sbjct 1689 GCATTCAACAA-GAACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGA 1631 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900 ||| | || || || || ||||| || ||| || || ||||| ||||| | ||||| Sbjct 1630 ATAAGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTC 1571 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 || | ||| || || | || |||| || ||||||||||| || ||||| || Sbjct 1570 TGGAATTTGCACCTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGA 1511 Query 4961 GGCTGCAAAAAACGCCA--AAACATGAGAT-ATAAAGTACT-GTTCGTCAGGCTTAAGTT 5016 || ||||| ||||| | | | ||||| | ||| || |||| || | | | Sbjct 1510 AGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTGT 1452 Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076 | ||||||| | | ||| || | ||||| | ||||||| |||||||||| || || | Sbjct 1451 TGTTCCAGTCATGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCT 1392 Query 5077 CCGCTTTTTTGTA 5089 | ||| | || || Sbjct 1391 CGGCTCTCTTATA 1379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427043895684968