Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq65 309 4e-79 seq582 208 1e-48 seq35 129 8e-25 >seq65 Length=9430 Score = 309 bits (342), Expect = 4e-79 Identities = 1365/2143 (64%), Gaps = 46/2143 (2%) Strand=Plus/Plus Query 76778 CAAT-GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 |||| || ||||| || | | |||||| | || || | ||||||||||||||| || | Sbjct 5999 CAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGATAGTACATACCGGTCT 6058 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGG 76896 | | |||| |||||||||||||||||||| |||| || | | ||| | Sbjct 6059 TCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTGGAGCAC 6118 Query 76897 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 76956 || ||||| |||| ||| || |||||||||| |||| | | ||||| ||||| | Sbjct 6119 GAATGTGAATGTTCAACGATTGGGATTGATCGATGTAAGCAGCACGGTCAGCGGCCATAT 6178 Query 76957 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 77016 |||||| |||||| | |||||||||| ||| ||| | | | ||| | || | || Sbjct 6179 CGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGCTCTTGTG 6238 Query 77017 GAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCAT 77073 | | ||||| ||||| || |||||| ||| | || || ||| ||| | | Sbjct 6239 GGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTCATAGCTT 6298 Query 77074 CATTCCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132 ||| ||| ||| || || ||| | | || | | ||| || || ||||| ||| Sbjct 6299 CATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGATTTGGAAT 6357 Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192 || ||||| || || | ||||| ||| || || || ||||| || | | | || ||| Sbjct 6358 TCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTG 6417 Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252 | ||||||||||||| ||||||||||||||||| || || | ||| ||| ||||| Sbjct 6418 TAACCCAAAATTTGAGATGTAGAAGCAGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTT 6477 Query 77253 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACA 77312 ||||| ||| |||||| | | || | | | ||| ||||| || | | || Sbjct 6478 AGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTC 6537 Query 77313 ACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCA 77372 | |||| |||||| |||||| | || | | || || || | | |||| Sbjct 6538 TTACCCCATAGATCGAATTGTAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCA 6597 Query 77373 TAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTT 77432 || || |||||| | || | ||| ||||| | || |||| || || ||| Sbjct 6598 TATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCGTGGTAGATAGTT 6657 Query 77433 TCGAAAATCTTCTTATTGAGATCT-TGTGCTTCAATACTATCAAACGGATAATGTAAAAG 77491 || || || | || | |||| | |||||| ||||| || || ||| | Sbjct 6658 TCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCGGAGTCAAATGGCAAACGTAGCAT 6716 Query 77492 AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 77551 || || || || ||||| || ||||| || | |||||||||| |||||| | || || Sbjct 6717 CATGAAAGCGTCCGCTAAACCTTGAACACCCAATGCAATAGGTCTGTGTCTCATGTTTGA 6776 Query 77552 AATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAAC 77611 || | || | || |||||||| ||| ||| || ||| | || | || | Sbjct 6777 TCTTCTGGCAGTTTCAACTGGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGGGT 6836 Query 77612 AACTACTTTAACCACGTC------CTTTAGTTTAAG----AAAATCAAATCTT-CCATCT 77660 | || ||| | || |||| || ||| | | | |||| ||||| Sbjct 6837 CAAAACCTTAGAGATATCATGCAACTTT--TTGAAGTTGTACGTTTGAGTCTTACCATCG 6894 Query 77661 AT---------AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCA 77711 | || ||| |||||| ||||| || | ||||| || || || Sbjct 6895 CTTGATAGTTCAATGAACGCTGGCAAAGCAATAGAAGCCAAGTTACAGACAGCGGTTTCC 6954 Query 77712 TTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771 | | ||| | |||| | || || ||| | || | | |||||||| |||| Sbjct 6955 TCTGGGTTAGAGTATTCGACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAG 7014 Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 || | ||| || ||||| || || || | || || || || || || || || || ||| Sbjct 7015 TTCTTTTGATTACTCTTCTTGTTACAAGCATCTTTGTATAGCATGAATGGGGTACCAGTT 7074 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGT 77889 || | || | ||| | |||| | ||| | ||| | ||| || | | ||| | Sbjct 7075 TCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCTTGACAGTC--TTTCT 7130 Query 77890 ATC---GCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAAC 77944 | | |||| ||||| || || | ||| | || |||||||||||| || |||| Sbjct 7131 ACCACGGCCT-TCTCTCTCGTAACGTTCGTACAATGC--TTCAAATTCATCACCGTAAAC 7187 Query 77945 ATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAAC 78004 ||| | || || ||||||||| | | ||| | ||| || | | | | || Sbjct 7188 ATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAAAGTCCAATCTTCGTTCTTTTCGAC 7247 Query 78005 TCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTC 78064 || ||||| || ||||| || |||||||| || || | |||| | | ||| Sbjct 7248 TCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTC 7307 Query 78065 TTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 78124 ||| || || |||||| | | |||| || || | ||||| || |||||||| || Sbjct 7308 TTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTC 7367 Query 78125 TAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGT 78184 | || | || | | ||||||| || ||||| || || || | || | || || Sbjct 7368 GATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGT 7427 Query 78185 GTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAAT 78244 ||| || |||| | | ||||||||||||||||||||| || || || || |||| ||| Sbjct 7428 GTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAAT 7487 Query 78245 ATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGA 78304 ||| || | | ||||| || |||| | || || || || || ||||||| Sbjct 7488 GTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGA 7547 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTT 78364 || | || || ||||| || ||||| ||||| || || || ||| ||||| Sbjct 7548 GATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATCGAATCTTCCTTCATGGC 7607 Query 78365 AAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGA 78424 | || ||||| |||||||| ||||| ||| || ||||| || | ||| || || Sbjct 7608 CACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTTGGCGA 7667 Query 78425 TGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC 78484 || || || || || || ||| | ||| ||||| ||||| | | | ||| || || Sbjct 7668 AGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATC 7727 Query 78485 CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTT 78544 | || || || || || || | ||| | ||| || ||||| | |||| | ||| Sbjct 7728 TCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGGCGTTCAGCAACCTT 7787 Query 78545 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 78604 | || ||| | | |||||| || |||||| || || ||||| || |||||| || Sbjct 7788 ACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGTTGAATTG 7847 Query 78605 AAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC 78664 || ||||| ||||| | ||| |||| || | ||||||||| || | || || || Sbjct 7848 GAAATCTCTGTCGTAGACAATTGCAGAGTTCAAAGTATCTTTGTTTTCCATGACGATGTC 7907 Query 78665 CATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAA 78724 || | ||||| ||||| || | | |||| | || || || || | | | Sbjct 7908 ATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTTTGGGTTGACCCATCTGTA 7967 Query 78725 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784 || ||||| | || | ||| | || | |||| |||||| | ||||| | ||| Sbjct 7968 CAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTGCAAGTTAGAAATAGC 8027 Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 78843 ||||| || || | | |||| ||||| || || || || || || ||| | ||| Sbjct 8028 AATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CATGTAGGCACATGTTT 8086 Query 78844 CTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATA 78886 | || || || ||||||| || | ||| || || || | ||| Sbjct 8087 CAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 8129 >seq582 Length=15002 Score = 208 bits (230), Expect = 1e-48 Identities = 586/890 (66%), Gaps = 30/890 (3%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || || ||| | || ||||| ||||| ||||| || |||| || || ||| Sbjct 2214 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 2155 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 |||||||| || ||||| ||| | || || ||| || ||||| | | Sbjct 2154 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 2095 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 ||||| |||||||| ||||| | ||| ||||||| ||| ||||| || | || Sbjct 2094 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 2035 Query 48030 TTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 ||| |||||||| || | ||| | ||||| |||||| ||||| || | | Sbjct 2034 GAAACGGGTAGAGCGTCAATGAAGTATCTCTT-TTCGATCTCAACAGCTTC------TGT 1982 Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATA---------CAACAAATGTTTAAACATTAA 48139 |||| | | |||| || | ||||| | |||||| | || | ||| Sbjct 1981 -GATGATTC--TTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGTAA 1925 Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 ||| ||||| || || | |||||||||||| | ||| |||||||| || ||||| | Sbjct 1924 ACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAATGTCAA 1865 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 ||| ||||| | || || || | ||| || || || ||||| || ||||| || || Sbjct 1864 ACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAA 1805 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316 | ||||| ||||| || || || | ||| || | || ||||||| || | Sbjct 1804 CACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCATATAGAGCTTCGTCGTCACG 1745 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCAT 48375 ||||| | ||||| | |||||| |||||| | || || ||||| || |||| Sbjct 1744 AATCCATCTAATGGCCCATTGAGCCTT-TTCTTTGATTTGTGGAATGGTTTCAATGGCAT 1686 Query 48376 TAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACA 48435 | || | || | | || || ||| || | |||||| || || || | ||| Sbjct 1685 TCAACAAGAACTCGTGCTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAG 1626 Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 | ||||||||||| ||||| || || || || ||||| || || | ||||||| | Sbjct 1625 TCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAGCACTTGGCTTCTGGAA 1566 Query 48496 TCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAG 48555 | || ||||| | | || ||| |||| || || || || || ||||| ||||| Sbjct 1565 TTTGCACCTCAGCGGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAG 1506 Query 48556 CAAAAAATGCTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCAGT---TTATTC 48611 |||| || || | || | | | || ||| || | ||||| ||| | || ||| Sbjct 1505 CAAAGAACGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTC 1447 Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671 ||||||| || ||| || || | ||| | ||||||||| |||||||| || ||||| ||| Sbjct 1446 CAGTCATGGAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCT 1387 Query 48672 TTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 | ||||| | ||| || || ||| | ||||||||||| ||||| Sbjct 1386 CTCTTATAAGCTTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 1337 >seq35 Length=84627 Score = 129 bits (142), Expect = 8e-25 Identities = 191/269 (71%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061 ||| |||| |||||| ||||| || |||||||| ||| ||||| ||||||| || Sbjct 61096 AACACGTTGCATAAAAAGATCCGGAATCCATAGGGCATAAAATAAGTCTCGGGCCCTCAT 61155 Query 78062 TTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 |||||| ||||| ||||||| | || | | || || ||||| ||| ||||||||| Sbjct 61156 TTCTTCTTTTCCATGATTCTTTCTTAGTTGTAAGAAGTCAATAATGTCACCATGCCATGG 61215 Query 78122 TTCTAGATATATTGCCATAA--CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179 ||| | ||||| || || | || || ||||| || || || || || | |||||| Sbjct 61216 TTCCAAGTATAT--ACAAAAGGCACCGGGGCGTTTGTTCCCACCTTGGTCGACATATCTT 61273 Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || ||||| ||| |||| | || ||| || | | || ||||| || ||||| | || Sbjct 61274 GCCGTGTTGTTAAAAACCCGCAGCATAGGCACTAAGCCATTAGAAGTACCATTCGACCCT 61333 Query 78240 GAAATATAACTTCCACTTGCGCGAATATT 78268 || |||||| ||| |||| | ||||| Sbjct 61334 GAGATATAAGCACCATTTGCCCTTATATT 61362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694659283037440