Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq689 150 4e-31 seq493 149 1e-30 seq1042 87.8 4e-12 >seq689 Length=43288 Score = 150 bits (166), Expect = 4e-31 Identities = 143/183 (78%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | || || || | ||| || || ||||| Sbjct 11419 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 11360 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| |||||||| ||||||||||| ||||| | || || | Sbjct 11359 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATT 11300 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||||||||| | |||||| |||||||| ||||| ||||| || Sbjct 11299 GTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGAC 11240 Query 283088 GAA 283090 ||| Sbjct 11239 GAA 11237 >seq493 Length=23338 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | ||||| || | ||| || || ||||| Sbjct 23317 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 23258 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| |||||||| ||||||||||||||||| | || || | Sbjct 23257 GATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATT 23198 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||||||||| | || || |||||||| || | ||||| || Sbjct 23197 GTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGAC 23138 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 23137 GAAAATTTGCAT 23126 >seq1042 Length=4533 Score = 87.8 bits (96), Expect = 4e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| || || | |||||||| | || || ||||||| || ||||| |||||| Sbjct 1988 GTTGGGAAACCGTCAACTTGACCGTTGGCGATAGCTCTCATCAAGGTAGACTTACCAGCA 2047 Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145 || || || || || | ||| || | | | |||||| | || | || |||||| Sbjct 2048 CCGTTTGGACCACACAAACCGTATCTTCTGGCTCTCTTCAATCTCAATTGAGTCTTGTTC 2107 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | | |||||| |||| || |||| |||||||||||| | ||||| ||| || || Sbjct 2108 AACAAGATCTTAGCACCGTAAGCCAAAGAGAACTCACAGTTACACAAGTCTTCACC 2163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046724501164784