Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07-
21] 1,096 sequences; 10,695,463 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq582 143 3e-29
>seq582
Length=15002
Score = 143 bits (158), Expect = 3e-29
Identities = 532/822 (65%), Gaps = 19/822 (2%)
Strand=Plus/Minus
Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299
||||||| ||||| || ||||| | || || || ||||||||||| || ||||| ||||
Sbjct 2192 TTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAATGGGTTAG 2133
Query 23300 AAGTATTATA-TACAGCTT--TACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATT 23356
|| || || ||| ||| | | || || | || ||||| |||||||
Sbjct 2132 TGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTA---GTCTGTCTGCAACAAATT 2076
Query 23357 CAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCAT 23416
| | ||||| |||||||||| ||| ||||| | ||| || || | || |||
Sbjct 2075 CGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGCGTCAA 2016
Query 23417 ATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT---TGAACAATAACTTCTT 23473
||| || ||||| || |||||| ||| | || ||| | ||||| |||
Sbjct 2015 TGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAAT--CTTTGG 1958
Query 23474 CACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTT 23533
|| | | | | || |||| | || | |||||| ||||| || || | ||||
Sbjct 1957 ATCTGGCTTGTTCTTC-AAATGATGGAATAGTAAACAGGCAAAGTCGGTGTGCAAACCTT 1899
Query 23534 CATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAA 23593
|||| || | ||||||||| || || ||||| || |||||||| || || || || |
Sbjct 1898 CATCTCTGCAAATCAATTCGTTTGAGAATGTCAAACCTGGCATCAAACCCTTCTTCTTCA 1839
Query 23594 TCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCA 23653
||| || || ||||| || || || || || || | ||| || || || || || || |
Sbjct 1838 ACCAGAAGATGGCAGCGAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAA 1779
Query 23654 CAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCT 23713
| | | | | || || || | | ||| ||||||| | | | ||| | |||||
Sbjct 1778 CCAATCTTTCAGCATATAGAGCTTCGTCGTCACGAATCCATCTAATGGCCCATTGAGCCT 1719
Query 23714 TCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTAT 23773
| ||| | ||| |||||||| || || || | || | || | | ||
Sbjct 1718 TTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAACTCGTGCTCCTTAGGAT 1659
Query 23774 CTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAA 23833
| | || || || ||||| | || ||| | || || ||||| ||||| || ||
Sbjct 1658 CCTTGATGTAAGTGTCAATCAACAACGAATAAGTCTCGGAGTGAATGTTTTCCATCATAA 1599
Query 23834 TCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAG 23893
| || || || || || || | ||||| | | ||| || ||| | || |||
Sbjct 1598 TTTGGAAACCGTAGAAGCACTTGGCTTCTGGAATTTGCACCTCAGCGGAGAAGTTTTCCA 1539
Query 23894 CTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT-- 23951
| || |||||||| || |||||||| |||||||||||| ||||| || ||
Sbjct 1538 CCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGCAAGCACTCTGGAGATGA 1479
Query 23952 AAAATGTCT--TTCATCAGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATC 24008
||||| ||| ||| || ||| || | || ||||| |||| | ||| || || |||||
Sbjct 1478 AAAATCTCTCGTTC-TC-GTTCATTCTGTTGTTCCAGTCATGGAGATCCTTGGACAAATC 1421
Query 24009 AACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050
| ||| ||| | ||||||||| ||| ||| | ||||||
Sbjct 1420 GATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATA 1379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521480855614400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |