Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq8 246 4e-60
seq3 170 2e-37
seq5 152 6e-32
>seq8
Length=958696
Score = 246 bits (272), Expect = 4e-60
Identities = 585/882 (66%), Gaps = 4/882 (0%)
Strand=Plus/Plus
Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840
||||||| || || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 334940 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 334999
Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900
||||||| ||||||||||| | || | ||| | || || | ||| | ||||||
Sbjct 335000 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 335059
Query 53901 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTC 53958
| | | ||| || | | |||||| ||||| || |||||| |||||| ||
Sbjct 335060 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 335117
Query 53959 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 54018
|| || |||||| || || || ||| | ||| | | ||| | ||| ||| |
Sbjct 335118 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 335177
Query 54019 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 54078
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 335178 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 335237
Query 54079 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 54138
| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 335238 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 335297
Query 54139 ATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 54198
||||| || || | ||| | || | | ||||| | ||||| || || || || |
Sbjct 335298 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 335357
Query 54199 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 54258
||| | ||| ||||| || |||| | | ||||||||||||||| || || | ||| ||
Sbjct 335358 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 335417
Query 54259 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCC 54318
|| || | || || || | | |||||| || ||| | ||| || || ||
Sbjct 335418 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 335477
Query 54319 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 54378
|| | |||||||| | || ||| || || || || || || || || || |||
Sbjct 335478 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 335537
Query 54379 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 54438
||| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 335538 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 335597
Query 54439 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGC 54498
| ||||| |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 335598 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 335657
Query 54499 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 54558
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 335658 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 335717
Query 54559 TTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 54618
|||| | | ||| ||| ||| | |||||||| || |||||| || || ||||| ||
Sbjct 335718 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 335777
Query 54619 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660
|||||| || || |||| ||||| | ||| | |||||
Sbjct 335778 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTT 335819
>seq3
Length=1603786
Score = 170 bits (188), Expect = 2e-37
Identities = 578/886 (65%), Gaps = 22/886 (2%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| || ||| | |||||||| ||||| |||||||| | || || || |||
Sbjct 440149 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 440090
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTAAATCCCAATTCAGAAA 23961
||||| || ||| |||| || || || || ||| ||||| | | || || || |
Sbjct 440089 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTA--CCTAAAGCAACCA 440032
Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021
| ||| ||||| ||||| || | ||| ||||||| ||| ||||| || | |
Sbjct 440031 GTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATA 439972
Query 24022 GTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080
| ||| || ||||| | | ||| | |||| ||| || || || ||||| ||
Sbjct 439971 GAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATG 439913
Query 24081 ATAGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACA 24136
|| |||| || | | | | || | | | | | ||||| | || | ||||||
Sbjct 439912 AT---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACA 439857
Query 24137 TGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 24196
|| || ||| ||| | ||| || ||||| | ||| |||||||| || || || | ||
Sbjct 439856 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 439797
Query 24197 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAAT 24256
||||| | || ||| || | ||| || |||| ||||| || ||||| || || |
Sbjct 439796 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACAC 439737
Query 24257 TCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCAT---GTAT 24313
||||| || || || || |||| | |||||| | || ||| ||||| | ||
Sbjct 439736 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAAT 439677
Query 24314 CCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 24372
||| || || ||||| | ||||| | ||| | || || || || || ||||| |
Sbjct 439676 CCATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCA 439618
Query 24373 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTT 24432
| | | | | ||| ||| ||| || | || || |||||||| | ||| |||
Sbjct 439617 ACAAGAATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTT 439558
Query 24433 CCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 24492
| || || |||||||| || ||||| || ||||||||||| | || || | ||| |
Sbjct 439557 CGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTT 439498
Query 24493 GTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 24552
| || || | | || ||| | || ||||| ||||| || || || || ||||
Sbjct 439497 GCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAA 439438
Query 24553 AAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAAT 24609
| ||||| | || || ||| || | ||| ||| || || || ||||| |
Sbjct 439437 AGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGT 439378
Query 24610 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 24669
||| | ||| || || | ||| | |||||| | |||||||| || ||||| || | |
Sbjct 439377 CATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCT 439318
Query 24670 TATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
|||| | |||||| || || || | ||||| |||| |||||
Sbjct 439317 TATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 439272
>seq5
Length=1351113
Score = 152 bits (168), Expect = 6e-32
Identities = 207/287 (72%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 53989 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 54048
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 98550 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 98491
Query 54049 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 54108
|||||||| ||||| ||||| |||| || || ||| || ||||| ||||||
Sbjct 98490 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 98431
Query 54109 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAA- 54167
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 98430 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATAT--ACAAAAG 98373
Query 54168 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 54226
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 98372 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 98313
Query 54227 AACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 54273
| ||| |||| | |||||| || | |||||| | ||| ||||||||
Sbjct 98312 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATA 98266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721540627840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |