Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq2 118 2e-21 seq3 91.5 2e-13 >seq2 Length=1698977 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| | ||||||||||| || ||| | || ||||| | | Sbjct 909056 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCT 909115 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || |||||||| || |||||||| || || || ||| Sbjct 909116 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 909175 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | |||||||| || ||||||||||| || | |||| || || || || Sbjct 909176 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 909235 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| ||||| || | || || || || | || |||||||||| Sbjct 909236 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGGTAT 909285 >seq3 Length=1603786 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || |||||||| || |||||||| ||||| || |||||||| | || ||||| || || Sbjct 1548573 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 1548514 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||||| || || || |||| || || || || || ||||| ||||| || | || Sbjct 1548513 CAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCCTTCAC 1548454 Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTA 124770 ||||| || | || |||||||||||| Sbjct 1548453 TTGGTCTTGAGACTAAGAGGTGGTATTA 1548426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455924454400