Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq2 120 5e-22 seq5 104 3e-17 seq3 95.1 2e-14 >seq2 Length=1698977 Score = 120 bits (132), Expect = 5e-22 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| || || || || | |||||||| ||| || || || || || || Sbjct 909282 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGA-ATGTTGTAGTCGGA 909224 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 |||||||| | || ||||||||||| |||||||||||||||||||| || || ||||| Sbjct 909223 TAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGG 909164 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 ||| ||||| || ||||| ||| || ||| ||| || Sbjct 909163 AATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAAC 909104 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||| | ||||| ||||| ||||| || || || | ||| |||||||| Sbjct 909103 TTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 909056 Score = 116 bits (128), Expect = 6e-21 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || || || || | |||||||| || || || || || || Sbjct 909054 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGAT 908995 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | || |||||||| || || ||||||||||||||||| || || |||||| Sbjct 908994 AGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGA 908935 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| |||||||| ||| || ||| ||| ||| Sbjct 908934 ATACCTTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACT 908875 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280 || | ||||| || ||||||||||| || || | || ||||||||||| Sbjct 908874 TCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTTT 908825 Score = 102 bits (112), Expect = 1e-16 Identities = 154/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| | || || ||||| || | || ||||| || || || || || || Sbjct 909510 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 909451 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | || |||||||| || |||||||||||||||||||| || || |||||| Sbjct 909450 AGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 909391 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || ||||| ||| || ||| ||| ||| Sbjct 909390 ATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACT 909331 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | ||||| || |||||||| || || || | ||| |||||||| Sbjct 909330 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 909284 >seq5 Length=1351113 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| || | |||||||| || || || || || || Sbjct 1192850 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 1192791 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||| | ||| || ||||| || |||||||| ||||||||||| || || |||||| Sbjct 1192790 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1192731 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 1192730 ATACCTTCCTTGTCTTG 1192714 >seq3 Length=1603786 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||| || ||||| || | || ||||| || || || || || || Sbjct 1548431 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1548490 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||| | || || ||||| || |||||||| ||||||||||| || || || ||| Sbjct 1548491 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1548550 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 1548551 ATACCTTCCTTGTCTTG 1548567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743526325647360