Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq2 105 5e-18
seq5 104 2e-17
seq3 82.4 6e-11
>seq2
Length=1698977
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--T 45167
|||||||||||||| || || ||||| || || ||||| ||||||||||||||| |
Sbjct 909282 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 909223
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | |||| || | |||||| || || || ||||| | |||||||| ||||
Sbjct 909222 AGAGTT--CTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAG 909165
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| ||| || ||| || | | |||| | || |
Sbjct 909164 GAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAA 909105
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| |||| || || || ||||| |||| |||||| || |||||||||||
Sbjct 909104 CTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 909056
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--T 45167
|| |||||||| || || |||||||| || ||| ||||| || |||||||||||| |
Sbjct 909510 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 909451
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | |||| || | ||| || || || || ||||| | |||||||| ||||
Sbjct 909450 AGAGTT--CTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAG 909393
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| ||| || ||| || | | |||| | || |
Sbjct 909392 GAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGA 909333
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| |||| || || ||||| || |||| |||||| || |||||||||||
Sbjct 909332 CTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 909284
>seq5
Length=1351113
Score = 104 bits (114), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || |||||||| || || ||||| || ||||||||||| |
Sbjct 1192850 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 1192791
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | | || |||| ||| || || || || ||||| | |||||||| ||||
Sbjct 1192790 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAG 1192733
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| || || ||| || | | | |||| | || |
Sbjct 1192732 GAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGA 1192673
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| |||| |||||| ||||| || || || ||||| || || |||||||||
Sbjct 1192672 CTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCATG 1192623
>seq3
Length=1603786
Score = 82.4 bits (90), Expect = 6e-11
Identities = 101/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| | ||| || |||||||| || ||| ||||| || ||||||||||| |
Sbjct 1548431 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1548490
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | |||| |||| ||| || || || || ||||| | |||||||| || |
Sbjct 1548491 AAAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 1548548
Query 45228 GCACACCCTCCTTGTC 45243
| | ||| ||||||||
Sbjct 1548549 GAATACCTTCCTTGTC 1548564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075161480168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |