Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 1e-18
seq3 102 6e-17
seq5 93.3 3e-14
>seq2
Length=1698977
Score = 107 bits (118), Expect = 1e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||||||||| ||||| ||||||||||||||||||| | ||| | | ||||| |||||
Sbjct 909259 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 909200
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
||| || ||| | || | ||||||||| || || | |||||||| || ||| |
Sbjct 909199 TTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTT 909140
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
||| || | ||| ||||||| | || ||| | |||||| ||||||| ||
Sbjct 909139 AGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTGCCTGT 909080
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
||| || || || || ||||||||
Sbjct 909079 CAAAGTCTTGACGAAGATTTGCAT 909056
Score = 105 bits (116), Expect = 5e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||||||||| ||||| ||||| ||||||||||||| | ||| | | ||||| |||||
Sbjct 909031 GTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 908972
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
|| |||||| | || | ||||||||| || || | ||||||||||| || |
Sbjct 908971 CTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTT 908912
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
||| || | ||| ||||||| | || ||| | |||||| | || || ||
Sbjct 908911 AGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGT 908852
Query 18302 CAATGTTTTTACAAAAATTTGCATTTTTAAACTCTT 18337
|| || || ||||| |||||||||||||| ||||
Sbjct 908851 TAACGTCTTGACAAAGATTTGCATTTTTAATGTCTT 908816
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| ||||| ||||| ||||| ||||||||||||| | ||| | | |||||
Sbjct 909492 ACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCT 909433
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| | || | ||||||||| || || | |||||||| || |
Sbjct 909432 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 909373
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | ||| || | ||| ||||||| | ||| ||| | ||||| | ||
Sbjct 909372 ATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTA 909313
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| ||||| || || || || ||||||||
Sbjct 909312 CCTGTCAAAGTCTTGACGAAGATTTGCAT 909284
>seq3
Length=1603786
Score = 102 bits (112), Expect = 6e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || | |||||| | |||| |||||| || ||||| ||||| ||||||||||| | |
Sbjct 1548431 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1548490
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| ||| ||||||||||| || || ||| |||| | ||||||||| || ||
Sbjct 1548491 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1548550
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| |||||||| || ||| | |||||| | ||| |||||| | ||| |
Sbjct 1548551 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACT 1548610
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAA 18317
|| | |||||| | || || ||||| || || || |||
Sbjct 1548611 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAA 1548649
>seq5
Length=1351113
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||| ||||| ||||||||||| | || ||| ||| |||||||
Sbjct 1192832 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 1192773
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 1192772 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 1192713
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||| | ||| ||| | ||| || | ||
Sbjct 1192712 ATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTA 1192653
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || | || || || |||||||||||
Sbjct 1192652 CCAGTTAGGGTCTTGACGAAAATTTGCAT 1192624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343963013960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |