Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2 107 1e-18 seq3 102 6e-17 seq5 93.3 3e-14 >seq2 Length=1698977 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 ||||||||| ||||| ||||||||||||||||||| | ||| | | ||||| ||||| Sbjct 909259 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 909200 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 ||| || ||| | || | ||||||||| || || | |||||||| || ||| | Sbjct 909199 TTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTT 909140 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 ||| || | ||| ||||||| | || ||| | |||||| ||||||| || Sbjct 909139 AGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTGCCTGT 909080 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 ||| || || || || |||||||| Sbjct 909079 CAAAGTCTTGACGAAGATTTGCAT 909056 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 ||||||||| ||||| ||||| ||||||||||||| | ||| | | ||||| ||||| Sbjct 909031 GTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 908972 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 || |||||| | || | ||||||||| || || | ||||||||||| || | Sbjct 908971 CTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTT 908912 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 ||| || | ||| ||||||| | || ||| | |||||| | || || || Sbjct 908911 AGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGT 908852 Query 18302 CAATGTTTTTACAAAAATTTGCATTTTTAAACTCTT 18337 || || || ||||| |||||||||||||| |||| Sbjct 908851 TAACGTCTTGACAAAGATTTGCATTTTTAATGTCTT 908816 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| ||||| ||||| ||||| ||||||||||||| | ||| | | ||||| Sbjct 909492 ACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCT 909433 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| | || | ||||||||| || || | |||||||| || | Sbjct 909432 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 909373 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | ||| || | ||| ||||||| | ||| ||| | ||||| | || Sbjct 909372 ATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTA 909313 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| || || || || |||||||| Sbjct 909312 CCTGTCAAAGTCTTGACGAAGATTTGCAT 909284 >seq3 Length=1603786 Score = 102 bits (112), Expect = 6e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | |||||| | |||| |||||| || ||||| ||||| ||||||||||| | | Sbjct 1548431 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1548490 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| ||| ||||||||||| || || ||| |||| | ||||||||| || || Sbjct 1548491 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1548550 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||| || ||| | |||||| | ||| |||||| | ||| | Sbjct 1548551 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACT 1548610 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAA 18317 || | |||||| | || || ||||| || || || ||| Sbjct 1548611 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAA 1548649 >seq5 Length=1351113 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||| || ||||| ||||| ||||||||||| | || ||| ||| ||||||| Sbjct 1192832 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 1192773 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| |||| | ||||||||| || || | |||||||| || Sbjct 1192772 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 1192713 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||| | ||| ||| | ||| || | || Sbjct 1192712 ATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTA 1192653 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || | || || || ||||||||||| Sbjct 1192652 CCAGTTAGGGTCTTGACGAAAATTTGCAT 1192624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343963013960