Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 1e-19
seq5 105 6e-18
seq3 84.2 2e-11
>seq2
Length=1698977
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| ||||||||||||| ||||| | || |||||| | ||
Sbjct 909056 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCT 909115
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | || || | || ||||||||||| | || || |||||
Sbjct 909116 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 909175
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| ||||| || |||||| | ||| | ||| || |||
Sbjct 909176 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 909235
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| || ||||| | || | ||| |||| || ||||
Sbjct 909236 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGGTA 909284
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| ||||||| || || ||||| | || || ||| | ||
Sbjct 909284 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 909343
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | || || | || ||||||||||| | || || |||||
Sbjct 909344 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 909403
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| || || || |||||| | ||| | ||| || |||
Sbjct 909404 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 909463
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| ||||| ||||| || || || |||| | || |||| || |||
Sbjct 909464 ATCCAAAAGGAATCCACACTCCACTTGGTCTTGAGGTTGAGAGGAGGT 909511
>seq5
Length=1351113
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397
||||||||| ||| ||||||||||||||| ||||||||||| || || | || |||||
Sbjct 98517 ATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGC 98458
Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457
| || || ||||| ||| |||||| | | | || ||||| | | ||| ||||
Sbjct 98457 CCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATG 98398
Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517
||| || || | ||| | ||| || || || | || || || || |||||||| ||
Sbjct 98397 CCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATA 98338
Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565
| || |||||||| | || | ||||| || || | ||| || ||
Sbjct 98337 TCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGA 98290
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||||||||| ||||| || || || || || || ||| | || || ||| | ||
Sbjct 1192623 CATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTC 1192682
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | || | ||||| | || ||||||||||| | || || |||||
Sbjct 1192683 CGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 1192742
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|| | | || || ||||| || || |||||||| || ||| || || || ||
Sbjct 1192743 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 1192802
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||| ||||| ||||| || ||||| |||| | ||| |||| || |||
Sbjct 1192803 CATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 1192851
>seq3
Length=1603786
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| ||||| |||| || || || ||||| | || || ||| | || |||| |
Sbjct 1548649 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCAT 1548590
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
|| | ||||| | || ||||||||||| | || || ||||| || | |
Sbjct 1548589 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATT 1548530
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| || ||||| || || ||||||||| || ||| || || || ||||| |||||
Sbjct 1548529 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAA 1548470
Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || ||||| |||| | ||||| || || ||||
Sbjct 1548469 GGAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGGTA 1548429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766355423360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |