Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 3e-20
seq1 105 1e-17
seq8 89.7 1e-12
>seq3
Length=1603786
Score = 114 bits (126), Expect = 3e-20
Identities = 297/445 (67%), Gaps = 17/445 (4%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| || ||||| || ||||| | || || |||| | || || |||| ||||||
Sbjct 439713 GTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTTGCTGCCATCTTCTGG 439772
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| | |||| | |||| ||| | |||| ||| || || || |||| || ||
Sbjct 439773 TTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTGATTTGCAGAGAT 439832
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | || ||||||||| || |||| || | | |||| || | |
Sbjct 439833 GAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCATCA----TTTGAAGAA---CAA 439885
Query 102098 TCAAGAGA-AAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153
| ||| || |||| | |||| | |||| ||||| || || ||| |||| |
Sbjct 439886 GCCAGATCCAAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCGAA-AAGAGAT 439944
Query 102154 TCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGT 102212
|| || | | || || ||| || |||| |||||| | ||||||| ||| |
Sbjct 439945 ACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGATGAACCAAT 440004
Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAA 102270
|| | |||||||| ||||| | |||| |||||| | || || ||||| |||| ||
Sbjct 440005 ACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAAGAAAT--ACTACAA 440062
Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330
|| || ||||| ||| || ||||| || |||||| | | ||| ||||| || ||
Sbjct 440063 CGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAACCAATTTCTT 440122
Query 102331 TGAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||| | || || |||
Sbjct 440123 CGAAAAGAGAGTGTCAGACTACCAA 440147
>seq1
Length=1734505
Score = 105 bits (116), Expect = 1e-17
Identities = 167/237 (70%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 35384 GATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCT 35443
|||||| ||||| ||||||||||| || || || ||||||||| | ||||| || ||
Sbjct 873952 GATAGACGTGAGGGTGATTTGGGACCAGTTTATGGGTTCCAATGGAGACATTTCGGAGCA 873893
Query 35444 GAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATA 35503
||||| | || ||| |||||| | ||| | ||| ||||||| || | || |
Sbjct 873892 GAATACAAGACATGTGACGATGATTATTCGGGACAAGGTGTTGATCAGTTAAGCGATGTG 873833
Query 35504 CTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562
| | | ||| |||| ||||| | ||||||||||| |||||| | |||||||| ||
Sbjct 873832 ATTCATAAGTTGA-AGAACAATCCTTACGATAGAAGGATTATTATGTCAGCATGGAACCC 873774
Query 35563 TATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
| ||| | | ||||||||||| |||||||| || |||| || |||||
Sbjct 873773 TCCTGATTTCCCAAAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTCTATGT 873717
>seq8
Length=958696
Score = 89.7 bits (98), Expect = 1e-12
Identities = 182/268 (68%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| ||| | || | || ||||| ||||| ||||| || || ||||| | |||
Sbjct 335455 TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTG 335514
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893
|| |||||||| |||||| ||| || | | | ||| ||||| || || || | |||
Sbjct 335515 TCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGT 335574
Query 94894 GGTGTGACT-GTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952
|| ||| || ||| ||| || ||||| || ||||| || || || || ||
Sbjct 335575 GGA-TGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGA 335633
Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012
||| || | || ||||| | || || || ||| ||||| || |||||||||||
Sbjct 335634 CATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCAC 335693
Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040
| ||| ||||||| ||||| || |||
Sbjct 335694 TCTCATGATCATGTGTTGAGGACGTTCA 335721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583898567640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |