Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq8 289 4e-73
seq3 190 3e-43
seq5 145 1e-29
>seq8
Length=958696
Score = 289 bits (320), Expect = 4e-73
Identities = 752/1141 (66%), Gaps = 18/1141 (2%)
Strand=Plus/Plus
Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078
|||||||||| || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 334940 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 334999
Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63138
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 335000 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 335059
Query 63139 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTC 63196
| | | ||| || | | | |||||| ||||| | |||||| ||| || ||
Sbjct 335060 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 335117
Query 63197 GTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCC 63256
|| || |||||| || | || ||| | ||| | | ||| | ||| ||| |
Sbjct 335118 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 335177
Query 63257 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63316
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 335178 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 335237
Query 63317 TGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63376
|| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 335238 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 335297
Query 63377 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63436
||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 335298 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 335357
Query 63437 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63496
||| | ||| ||||| || |||| | | |||||||||||||||||| || |||| ||
Sbjct 335358 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 335417
Query 63497 GGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63556
||||| | || || || | | |||||| || ||| | ||| || || ||
Sbjct 335418 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 335477
Query 63557 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATC 63616
|| | |||||||| | || ||| || || ||||| || || ||||| ||| |||
Sbjct 335478 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 335537
Query 63617 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAA 63676
|| ||||| | ||| ||||| |||||||| || ||| ||| || ||||| ||
Sbjct 335538 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 335597
Query 63677 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63736
| ||||| |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 335598 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 335657
Query 63737 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63796
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 335658 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 335717
Query 63797 TTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63856
|||| ||| || ||| ||| | | |||||| || |||||| || || ||||| ||
Sbjct 335718 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 335777
Query 63857 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTT 63916
|||||| || || |||| ||||| | ||| | || || | |||| |||
Sbjct 335778 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATC------TTT 335831
Query 63917 GTTAACTATATCCATGGTA-ATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTT 63970
||| | || | ||| | | || | ||||| || || || || | ||| | ||
Sbjct 335832 GTTCTCCATGACGATGTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTT 335891
Query 63971 AGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTT 64030
|| || || | || | || || || | ||||| ||| | || | |||| |||
Sbjct 335892 TGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTT 335951
Query 64031 GTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGT 64090
||| | || || ||||| ||||| ||||| | | | || ||||| || || || ||
Sbjct 335952 GTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT 336011
Query 64091 ACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTAT 64149
|| || ||| | |||| || |||| | || ||||| || || ||||| || | ||
Sbjct 336012 -CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCAT 336070
Query 64150 A 64150
|
Sbjct 336071 A 336071
>seq3
Length=1603786
Score = 190 bits (210), Expect = 3e-43
Identities = 581/889 (65%), Gaps = 28/889 (3%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| || ||| | |||||||| ||||| ||||| || |||| || || |||
Sbjct 440149 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 440090
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
||||| || || || || || || || ||||| ||| || || || || |
Sbjct 440089 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 440030
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
| ||| ||||| || ||||| | ||| ||||||| ||| ||||| || | ||
Sbjct 440029 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 439970
Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529
||| || ||||| | | ||| | |||| ||| || || || | ||| || ||
Sbjct 439969 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 439911
Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGAT-------GTAAT--AAATGTTTAAACATCAA 33580
||| ||| || || ||||| || | ||||| | || | |||
Sbjct 439910 ---TCT------TTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAA 439860
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
||| || || ||| ||||| ||| || ||||| | ||| |||||||| || || || |
Sbjct 439859 ACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAA 439800
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
|| ||||| | || ||| || | ||| || |||| ||| || || || || || ||
Sbjct 439799 ACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAA 439740
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---G 33757
| ||||| || ||||| || |||| | ||| || | || ||| ||||| |
Sbjct 439739 CACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACG 439680
Query 33758 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33816
||||| || || ||||| | ||||| | ||| | || || ||||| |||||||
Sbjct 439679 AATCCATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCAT 439621
Query 33817 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 33876
| || | | | | ||| ||| ||| || | ||||| || ||||| | |||
Sbjct 439620 TCAACAAGAATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAG 439561
Query 33877 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33936
|||| || || |||||||| || || || || ||||||||||| | || || | ||
Sbjct 439560 TTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAA 439501
Query 33937 TCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTG 33996
| ||||| || | | | || ||| | || ||||| ||||| || ||||| || |
Sbjct 439500 TTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAG 439441
Query 33997 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCC 34053
|||| ||||| | || || ||| || | ||| ||| || || || ||||
Sbjct 439440 CAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCC 439381
Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113
| |||| | ||| || || | ||| | |||||| | |||||||| || ||||| ||
Sbjct 439380 AGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTC 439321
Query 34114 TTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
| ||||| | |||||| || || || | ||||||||||| |||||
Sbjct 439320 TCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 439272
>seq5
Length=1351113
Score = 145 bits (160), Expect = 1e-29
Identities = 218/308 (71%), Gaps = 4/308 (1%)
Strand=Plus/Minus
Query 63227 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63286
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 98550 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 98491
Query 63287 AGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTT 63346
|||||||| ||||| ||||| |||| | || ||| || ||||| ||||||
Sbjct 98490 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 98431
Query 63347 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63405
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 98430 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATAT--ACAAAAG 98373
Query 63406 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63464
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 98372 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 98313
Query 63465 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCA 63524
| ||| |||| | ||| ||||| ||||||| | || |||||||| | ||| | ||
Sbjct 98312 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCC 98253
Query 63525 CGAATATT 63532
| |||||
Sbjct 98252 CTTATATT 98245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817537018240
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