Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq8 269 3e-67
seq3 170 3e-37
seq5 163 4e-35
>seq8
Length=958696
Score = 269 bits (298), Expect = 3e-67
Identities = 747/1138 (66%), Gaps = 12/1138 (1%)
Strand=Plus/Plus
Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871
||||||| || || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 334940 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 334999
Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 65931
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 335000 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 335059
Query 65932 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 65989
| | | ||| || | | |||||| ||||| || |||||| ||| || ||
Sbjct 335060 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 335117
Query 65990 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 66049
|| || |||||| || || || ||| | ||| | | ||| | ||| ||| |
Sbjct 335118 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 335177
Query 66050 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCT 66109
|| | || |||| ||||| || ||||| || ||||| || ||| || || |||||
Sbjct 335178 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 335237
Query 66110 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATA 66169
| | ||| || || || |||||| | | |||| ||| | | ||||| |
Sbjct 335238 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 335297
Query 66170 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 66229
||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 335298 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 335357
Query 66230 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 66289
||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| ||
Sbjct 335358 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 335417
Query 66290 GGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCC 66349
|| || | || || || | | |||||| || ||| | ||| || || ||
Sbjct 335418 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 335477
Query 66350 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 66409
|| | |||||||| | || ||| || || || || || || || || || |||
Sbjct 335478 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 335537
Query 66410 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 66469
||| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 335538 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 335597
Query 66470 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 66529
| ||||| |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 335598 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 335657
Query 66530 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 66589
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 335658 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 335717
Query 66590 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649
|||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| ||
Sbjct 335718 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 335777
Query 66650 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 66709
|||||| || || |||| ||||| | ||| | ||||| | |||| || | |
Sbjct 335778 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCTC 335837
Query 66710 GTTAACTA---CATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 66766
| || | ||| || | || | ||||| || || || || | ||| | || ||
Sbjct 335838 CATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTGG 335894
Query 66767 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 66826
||||| | || | || || || | ||||| ||| | || | |||| |||||
Sbjct 335895 GTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTG 335954
Query 66827 TAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACA 66886
| || || | ||| ||||||||||| | | | || ||||| || || || || ||
Sbjct 335955 CAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CA 336013
Query 66887 AGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 66943
|| ||| | |||| || |||| | || ||||| || || ||||| || | |||
Sbjct 336014 TGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 336071
>seq3
Length=1603786
Score = 170 bits (188), Expect = 3e-37
Identities = 573/881 (65%), Gaps = 12/881 (1%)
Strand=Plus/Minus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|||||||| || ||| | |||||||| ||||| |||||||| | || || || |||
Sbjct 440149 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 440090
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986
||||| || |||||||| || | || || || ||| || || || || |
Sbjct 440089 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 440030
Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046
| ||| ||||| |||||||| | ||| ||||||| ||| ||||| || | ||
Sbjct 440029 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 439970
Query 36047 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105
||| || ||||| | | ||| | |||| ||| || || || ||||| || ||
Sbjct 439969 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 439911
Query 36106 AGATATTACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164
| || | | | | || | | | | | ||||| | || | |||||| || |
Sbjct 439910 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 439852
Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224
| ||| ||| | ||| || ||||| | ||| |||||||| || || || | || ||||
Sbjct 439851 AGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 439792
Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284
| | || ||| || | ||| || |||| ||||| || ||||| || || | ||||
Sbjct 439791 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTT 439732
Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-C 36340
| || || || || |||| | ||| || | || ||| ||||| | ||||| |
Sbjct 439731 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATC 439672
Query 36341 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 36400
| || ||||| | ||||| | ||| | || || || || || ||||| || |
Sbjct 439671 TAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAG 439613
Query 36401 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 36460
| | | ||| ||| ||| || | || || |||||||| | ||| |||| ||
Sbjct 439612 AATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAG 439553
Query 36461 TGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 36520
|| |||||||| || ||||| || ||||||||||| | || || | ||| || ||
Sbjct 439552 TGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACC 439493
Query 36521 TCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 36580
|| | | | || ||| | || ||||| ||||| || || || || ||||| |||
Sbjct 439492 TCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAAC 439433
Query 36581 GCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTATTCCAATCATTG 36637
|| | || || ||| || | ||||| | || || || ||||| ||||
Sbjct 439432 GCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGA 439373
Query 36638 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 36697
| ||| || || | ||| | |||||| | |||||||| || ||||| || | |||||
Sbjct 439372 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 439313
Query 36698 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
| |||||| || || || | ||||| |||| |||||
Sbjct 439312 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 439272
>seq5
Length=1351113
Score = 163 bits (180), Expect = 4e-35
Identities = 222/308 (72%), Gaps = 4/308 (1%)
Strand=Plus/Minus
Query 66020 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 66079
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 98550 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 98491
Query 66080 AGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 66139
|||||||| ||||| |||||| |||| || || ||| || ||||| ||||||
Sbjct 98490 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 98431
Query 66140 TTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAA- 66198
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 98430 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATAT--ACAAAAG 98373
Query 66199 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 66257
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 98372 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 98313
Query 66258 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCA 66317
| ||| |||| | |||||| || |||||||| | ||| |||||||| ||| ||||
Sbjct 98312 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATAAGCACCATTTGCC 98253
Query 66318 CGAATATT 66325
| |||||
Sbjct 98252 CTTATATT 98245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172734182720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |