Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq3 111 2e-19
seq8 98.7 1e-15
seq2 95.1 1e-14
>seq3
Length=1603786
Score = 111 bits (122), Expect = 2e-19
Identities = 319/485 (66%), Gaps = 17/485 (4%)
Strand=Plus/Plus
Query 52565 AAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTC 52624
|||||| | | ||||| | | |||||| | ||| ||||| | || ||| |
Sbjct 439651 AAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAAGCCCTATACGCTGAAAGAT 439710
Query 52625 TGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTT 52684
|||| ||||| ||| ||||||||||||||||| || ||| ||||| || || || |
Sbjct 439711 TGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTTGCTGCCATCTTCT 439770
Query 52685 ACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCG 52744
| || | ||| | ||||| || | || || ||||| ||||| | | |
Sbjct 439771 GGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTGATTTGCAGAG 439830
Query 52745 ACGAAGGAATGCACACAGATTTTGCGTGTTTG-TATT--ATAATACGCGCGTTAAAGAAA 52801
| ||||| ||||||| || ||||| |||||| |||| || || || |||||
Sbjct 439831 ATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCATCAT-------TTGAAGAAC 439883
Query 52802 AATTGTCATATGAAAAAATTCTAGA---CATGTTTAAAGAGGCCGTCGACATTGAAAA-A 52857
|| | || || ||| ||| | || || | | ||| || || || || ||||| |
Sbjct 439884 AA--GCCAGATCCAAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCGAAAAGA 439941
Query 52858 GAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGC 52917
|| | || | |||||| ||||||| || | ||||| |||||||| ||||| |
Sbjct 439942 GA-TACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGATGAAC 440000
Query 52918 GAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTAT 52977
| ||| |||| |||||||| |||||||| || | | ||| | |||||||||
Sbjct 440001 CAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAAGAAATACTAC 440060
Query 52978 AATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTT 53037
|| | |||||| || |||||| | ||||| || | | || ||||| || ||
Sbjct 440061 AACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAACCAATTTC 440120
Query 53038 TTCGA 53042
|||||
Sbjct 440121 TTCGA 440125
>seq8
Length=958696
Score = 98.7 bits (108), Expect = 1e-15
Identities = 576/900 (64%), Gaps = 29/900 (3%)
Strand=Plus/Plus
Query 153633 GCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTCC 153692
|| || || |||||||| ||||| || ||||| || ||| | |||| || |||||
Sbjct 334864 GCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCA 334923
Query 153693 GCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTT-GATTGCTTTTGCGGTTACA 153751
|||||| || | || || || | ||| | |||| |||| || || ||||||
Sbjct 334924 CAACACAAGTTCGAAGACTTGAT-AGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACA 334982
Query 153752 AGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAATA--GTA 153809
||| ||||||||||||||| |||| || || ||||||| |||| ||| | ||| |||
Sbjct 334983 AGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTA 335042
Query 153810 CGCATCAA--TGTGACCGCGGGCATTTGATCGCGAAACTGGCCCTTGTCT-TCGTAGTGT 153866
| || ||| | ||| | | || | || | | | |||| ||| ||||| ||
Sbjct 335043 C-CA-CAACTTTTGAGCCTTGACAGTCTTTC---TACCACGGCCTTCTCTCTCGTAACGT 335097
Query 153867 TTGTACCAGTATTCAAACTCATCACC--AAACGTATTGTTAAGCTCGGGACATTCGTTGG 153924
| |||| | |||||| |||||||| |||| | || ||||| | || |||||| |
Sbjct 335098 TCGTACAATGCTTCAAATTCATCACCGTAAACAT-CTGGTAAGC-CTGGTGCTTCGTTTG 335155
Query 153925 GACACATCAGTGACC-ATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGGGAACC 153983
|| | | || | || ||| | | |||| | || | ||| || | ||| || | |
Sbjct 335156 GAGAGAACAAAGTCCAATCTTCGTTCTTCTCG-ACTCTCTTCATGAAAAGATCTGGGATC 335214
Query 153984 CATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATGTTTCGACGCATG 154043
||||| || | || ||| | || | ||||| | || ||| | |||
Sbjct 335215 CATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATG 335274
Query 154044 TGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGCGCCTTTA 154103
| | || ||| | || || | ||||| || || | ||| | || || ||
Sbjct 335275 TCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGT 335334
Query 154104 CGCTTG---CCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAGCATGGGT 154160
| |||| || || || | |||| ||| | | ||||||||||| |||| ||| ||
Sbjct 335335 CTCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGA 335394
Query 154161 AGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCTTGCTGTTGCGG--CCTCGAACGC 154218
| | |||| | | |||||||| ||| ||| | | ||| |||| |
Sbjct 335395 ATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGT--AAGAACCGGTAGAACGAATGT 335452
Query 154219 TGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAATCGTTCAATG 154278
||| | || || |||||||| || || || ||||||||||| || || ||||| |
Sbjct 335453 TGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAG 335512
Query 154279 TGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACATGAACTCATCT 154338
||| || ||||| |||| ||| | ||||| || |||||||||||| ||| |
Sbjct 335513 TGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTT 335572
Query 154339 GCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGTGTA-CATCTTTGTG 154397
| ||| ||||| || ||| || | || || ||||| ||| | ||||| | |
Sbjct 335573 GTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAG 335632
Query 154398 CTCAAAAATTTATAAGACTTTATGGCATTATCAATGTCGTCT-CCAAAGATACCTAGAGC 154456
|| | || |||| | | | || ||||| || ||| || |||||| | |||
Sbjct 335633 -ACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATC-TCTACCGTGGATACCGACAGC 335690
Query 154457 TATACGCATGTGCATGTGTTGAATCCTTTCGGCAACTTTTTCGTTAATTTTTATCAGGTA 154516
| | |||| |||||||||| | ||| ||||| || |||| ||| ||| || |||
Sbjct 335691 CACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTA 335750
>seq2
Length=1698977
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | ||| |||||||||| ||||| || ||||||||||| || |||
Sbjct 909282 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 909223
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| | |||||||||||| | |||| | ||| || || |||||
Sbjct 909222 AGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 909163
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| | || | || | | || | ||||| | | || ||
Sbjct 909162 ATACCTTCCTTGTC-TTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAAC 909104
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || ||||| ||||| || || ||||| |||||||||
Sbjct 909103 TTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCATA 909055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063950393600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |