Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq3 156 4e-33
>seq3
Length=1603786
Score = 156 bits (172), Expect = 4e-33
Identities = 466/710 (66%), Gaps = 12/710 (2%)
Strand=Plus/Minus
Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655
||||| ||||| ||||| || |||||||| ||| || || ||||||||||| || |||
Sbjct 440134 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 440075
Query 13656 GGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAAT 13714
|| || | |||| | | ||| | ||||| | | |||| ||| || ||||
Sbjct 440074 GGGTT-AGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 440016
Query 13715 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13774
||| || | ||||| ||| |||||| |||||||| | ||| || || |
Sbjct 440015 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGC 439956
Query 13775 ATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTC 13834
| | | || || ||||| || ||||| ||| | || || || | |||||
Sbjct 439955 GTCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT- 439897
Query 13835 ATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGG 13892
|| || | | || | | ||| | || | ||||| ||||| || || |
Sbjct 439896 -TTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAA 439838
Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952
|| |||||||| | ||| | ||||||||| || || || ||||||||||| || ||
Sbjct 439837 CCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTC 439778
Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012
|| ||||| || || |||||||| || || || || || | || || || ||||| |||
Sbjct 439777 TTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTCCACGGCAGCGAAC 439718
Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCATTC 14071
|| | |||| ||| | | |||| | | ||| |||||| | | |||||||
Sbjct 439717 GCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGA-ATCCATCTAATGGCCCATTG 439659
Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTT 14131
|| |||| ||| || || |||||||| ||||| || || |||| | || ||
Sbjct 439658 AGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAATTCGTGTTCCTT 439599
Query 14132 AG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14189
|| | |||| ||||| || ||||| | || ||| |||| ||||| |||||||||
Sbjct 439598 AGGATCCTTG--ATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTGGATGTTTTCC 439541
Query 14190 ATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAAT 14249
|| || || ||||| || || || | ||||| | ||| || || | | ||
Sbjct 439540 ATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTCAGCAGAGAAG 439481
Query 14250 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC 14299
|||| |||| ||||| || || |||||||| ||| ||||| || ||
Sbjct 439480 TTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 439431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727952027200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |