Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8 239 6e-58 seq3 163 4e-35 seq5 161 1e-34 >seq8 Length=958696 Score = 239 bits (264), Expect = 6e-58 Identities = 743/1142 (65%), Gaps = 20/1142 (2%) Strand=Plus/Plus Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 ||||||| || || || || | |||||||||||| |||||||| |||||||| || || | Sbjct 334940 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 334999 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893 | || || ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 335000 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 335059 Query 71894 TTATTATATTCTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTC 71951 | | | || | || | | |||||| ||||| || || ||| ||| || || Sbjct 335060 TGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 335117 Query 71952 GTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCC 72011 || || || ||| ||| || || ||| || ||| | | ||| | ||| ||| | Sbjct 335118 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 335177 Query 72012 ATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 72071 | | | |||| ||||| || ||||| || ||||| || ||| || | ||||| Sbjct 335178 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 335237 Query 72072 GGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 72131 | | || || || || |||||| | | |||| ||| | | ||||| || Sbjct 335238 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 335297 Query 72132 ATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTAT 72191 ||||| || || | ||| | ||| | | || || | ||||| || || || || | Sbjct 335298 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 335357 Query 72192 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 72251 ||| | ||| ||||| || |||| | | ||||||||||||||| || || | ||| || Sbjct 335358 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 335417 Query 72252 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCC 72311 || || | || || || | | |||||| ||| ||| | ||| || || || Sbjct 335418 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 335477 Query 72312 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 72371 || | |||||||| | || ||| || || || || || || || || || ||| Sbjct 335478 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 335537 Query 72372 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 72431 ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| || Sbjct 335538 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 335597 Query 72432 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGC 72491 | ||||| |||||||| || || || || ||||| ||| ||||| || || | | | Sbjct 335598 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 335657 Query 72492 TGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCT 72551 ||| ||||| | || || || || || || | ||| | ||| || ||||| | Sbjct 335658 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 335717 Query 72552 TTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 72611 |||| | | ||| || ||| | | |||||| || |||||| || || ||||| || Sbjct 335718 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 335777 Query 72612 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671 |||||| || || |||| ||||| | ||| || | ||||| | ||| ||| Sbjct 335778 GTAGTTGAATTGGAAATCTCTGTCGTAGACAAT---CGCA--GAGTTCA-AAGTATCTTT 335831 Query 72672 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 72724 ||| | || | || || |||| ||||| || || || || | ||| | | Sbjct 335832 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 335890 Query 72725 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 72784 | || || || | || | || || || | ||||| ||| | || | |||| || Sbjct 335891 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 335950 Query 72785 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAG 72844 |||| | || || | ||| ||||| ||||| | | | || |||||||| || || | Sbjct 335951 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 336010 Query 72845 TACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 72903 | || || ||| | |||| || |||| | || ||||| || || ||||| || | | Sbjct 336011 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 336069 Query 72904 TA 72905 || Sbjct 336070 TA 336071 >seq3 Length=1603786 Score = 163 bits (180), Expect = 4e-35 Identities = 574/885 (65%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || ||| | |||||||| ||||| || || || |||| || || ||| Sbjct 440149 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 440090 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || || || || || || || ||| || || || || | Sbjct 440089 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 440030 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | ||| ||||| | ||||| | ||| ||||||| ||| ||||| || | || Sbjct 440029 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 439970 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 ||| || ||||| | | ||| | |||| ||| || || || ||||| || || Sbjct 439969 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 439911 Query 42013 AGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATG 42068 |||| || | | | | || | | | | | ||||| | || | |||||| | Sbjct 439910 ---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGG 439855 Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128 | || ||| ||||| ||| |||||||| | ||| |||||||| || || || | || | Sbjct 439854 CAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTG 439795 Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTC 42188 |||| | || ||| || | ||| || || | ||||| || ||||| || || | | Sbjct 439794 GCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACAC 439735 Query 42189 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCC 42245 |||| || || || || |||| | ||| || | || ||| ||||| | |||| Sbjct 439734 CTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCC 439675 Query 42246 A-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 42304 | || || ||||| | ||||| | ||| | || || ||||| |||||||| || Sbjct 439674 ATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAAC 439616 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 | | | | ||| ||| ||| || | || || || ||||| | ||| |||| Sbjct 439615 AAGAATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCG 439556 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 || || |||||||| || || || || ||||||||||| |||| || | || || Sbjct 439555 GAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGC 439496 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 || || | | | || ||| | || ||||||||||| || || || || ||||| Sbjct 439495 ACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAG 439436 Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAATC 42540 ||||| | || || ||| || | |||| | ||| || || ||||| || Sbjct 439435 AACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTGTTGTTCCAGTC 439377 Query 42541 ATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTT 42600 || | ||| || || | ||| | |||||| | |||||||| || || || || | || Sbjct 439376 ATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTT 439317 Query 42601 ATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 ||| | |||||| || || || | |||||||||| ||||| Sbjct 439316 ATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 439272 >seq5 Length=1351113 Score = 161 bits (178), Expect = 1e-34 Identities = 596/919 (65%), Gaps = 35/919 (4%) Strand=Plus/Minus Query 71373 TGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAA 71432 |||||||| | | ||||| | || | ||| || || |||||| | ||||| | Sbjct 99174 TGATCCTGGGAAACTTTCGTAGTGGCCATATTTCTCAGCGAGTTCAATAGATGCCTCAAT 99115 Query 71433 TGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGT-GCTTCCGGGCTAT 71491 ||| ||| ||||| ||||| || |||| ||||| | || | | || || | Sbjct 99114 TGCGGCATGGTAAATAGTTTCAAATATCTGTTTATTCA-ATGTGGCAGCATCTTCTGATT 99056 Query 71492 CAAATGGATAATTTA-AGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATA 71550 |||| || | | || |||| ||||| || ||||| | ||||||||| |||||| | | Sbjct 99055 CAAAGGG-TGTTCTACAGAGCATAAAAGCATCTGCAAGTCCTTGAACACCAATAGCTAAT 98997 Query 71551 GGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 71610 |||| |||||| || ||| || ||||| ||||| ||| || ||||||| Sbjct 98996 GGTCGGTGTCTTAAGTTGCCTCTTTTTGCCTCTGGGATAGGGTAAGCTCCAACATCTATA 98937 Query 71611 ATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 71670 || ||| ||||| || || | ||||| || ||| | || | | ||| |||||| Sbjct 98936 GTTCTATCTAGATTCCTAACCAACACTTTAACAACACGATGAAGAGTTACAAAGTCAAAT 98877 Query 71671 CTCC------CATC------TATT---ACAAAC--ACGTTCAAGGCAACAGATGCCAGAT 71713 |||| |||| || || | || | || || ||||| |||| Sbjct 98876 ACAGGAGAATCATCAGAAGTTATTTTGACGTACGTAGGT--AGTGCGACTGATGCAAGAT 98819 Query 71714 TACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTAC 71773 | || || ||||| || | | ||| | | |||||| ||||||||| Sbjct 98818 TGCAGACTGCTACTTCCTCTGGTGAACTATACTCCACGATTTCACAACAAAGATTAGACG 98759 Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833 |||| ||| ||||| |||| || || ||| | || || | |||||||||||| | Sbjct 98758 ACTTAATGACACCTAAGTTTTTCTGGTTGGACTTCTCATTGCATGAATCCTTATAAAGCA 98699 Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893 | || ||| || || || | ||| || || ||| | ||| | | | || | Sbjct 98698 TGAAAGGAACTCCTGTCTCCGTTTGACTTTGTAGAATTTCCGACCAAATTTGTTGCGCTT 98639 Query 71894 TTATTATATTC-TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCG 71952 | ||| | ||| ||| | || ||||| || || | | ||||| || |||||| Sbjct 98638 TCATTTTTTTCATTGGAA-TCAATTCTCGCTCATACTTTTCATATAGGGTTTTGAACTC- 98581 Query 71953 TCTCCCCAAGCATTGTC---TAATCCAGGACATTCATTCGGACACATCAATGACCACTCT 72009 | | || |||| ||| ||| || | ||||| |||| | | ||||| ||| Sbjct 98580 TGTACCATAGCA--GTCAGATAAACCTGTTGCTTCATCTGGACTAAAAATGGACCAATCT 98523 Query 72010 CCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 72069 ||| || | || |||| |||||| ||||| |||||||| ||||| ||||| ||| Sbjct 98522 TCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCT 98463 Query 72070 CTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 72129 | || || || || ||||| ||||||| | || | | ||| | |||||||| Sbjct 98462 CGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCC 98403 Query 72130 GAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCCGGCCGTTTGTTTCCTCCCTGAT 72187 |||||| |||||||||||||| || || | || || |||||||| || || |||| Sbjct 98402 CCATGCCATGGTTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGAT 98345 Query 72188 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCAC 72247 | | ||||| || ||||| ||| |||| | || ||| |||| | |||||| || | || Sbjct 98344 CGACATATCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTAC 98285 Query 72248 CATTGGTCCCGGAGATATA 72266 |||| | ||| |||||||| Sbjct 98284 CATTCGACCCTGAGATATA 98266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139132886080