Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 2e-24
seq5 123 2e-23
seq3 105 6e-18
>seq2
Length=1698977
Score = 127 bits (140), Expect = 2e-24
Identities = 169/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || || |||||||||| ||| || ||||| | |||||||||||||| | ||| |
Sbjct 909290 TTTGCATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGT 909231
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| ||| | ||| | || || | ||||| || |||| || |||||||| || |
Sbjct 909230 AGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGT 909171
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||||||||||||||| ||||| | ||| || | ||| || | | | ||||||||
Sbjct 909170 CTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAG 909111
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | ||||||||||| || || | ||| || || ||||| |||||
Sbjct 909110 ATTCAACTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 909056
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||||||||| | ||| |||||||| | || ||||||||||| | ||| || |||
Sbjct 909510 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 909451
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | || || | || || || |||| || |||||||| || |||||||||
Sbjct 909450 AGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 909391
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| || | ||| || | | | |||||||| |||||
Sbjct 909390 ATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACT 909331
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||| || || || || | ||| || || ||||| |||||
Sbjct 909330 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 909284
Score = 109 bits (120), Expect = 5e-19
Identities = 165/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || || |||||||||| ||| || ||||| | |||||||||||||| | ||| |
Sbjct 909062 TTTGCATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGT 909003
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| ||| | ||| | || || | || || || |||| || |||||||| || |
Sbjct 909002 AGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGT 908943
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||||||||||||||| || || | || || | ||| || | | | ||||||||
Sbjct 908942 CTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAG 908883
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | |||||||| || || || | || || |||||||| |||||
Sbjct 908882 ATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCAT 908828
>seq5
Length=1351113
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||| | |||||||||||||| | ||| || || |
Sbjct 1192850 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 1192791
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| |||| || || || ||||||| |||||||| || |||||||||
Sbjct 1192790 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1192731
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | || || | |||||| | | | ||||| | |||||
Sbjct 1192730 ATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACT 1192671
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|| | || || || || ||||| || || || || || || ||||||
Sbjct 1192670 TCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCATG 1192623
>seq3
Length=1603786
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || ||| |||||||| | || ||||||||||| | ||| || || |
Sbjct 1548431 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1548490
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | || |||| || || || ||||||| |||||||| || ||||| |||
Sbjct 1548491 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1548550
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| || | |||||| | | | ||||||| |||||
Sbjct 1548551 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACT 1548610
Query 94961 TCAATCGTGATGGTTTTTCCAGT 94983
|| | |||||||| || |||||
Sbjct 1548611 TCCAAAGTGATGGTCTTACCAGT 1548633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291155170880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |