Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq8 288 1e-72
seq3 179 5e-40
seq5 147 3e-30
>seq8
Length=958696
Score = 288 bits (318), Expect = 1e-72
Identities = 752/1142 (66%), Gaps = 20/1142 (2%)
Strand=Plus/Plus
Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027
|||||||||| || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 334940 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 334999
Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 335000 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 335059
Query 63088 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63145
| | | ||| || | | | |||||| ||||| || |||||| ||| || ||
Sbjct 335060 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 335117
Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205
|| || |||||| || || || ||| | ||| | | ||| | ||| ||| |
Sbjct 335118 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 335177
Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 335178 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 335237
Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325
| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 335238 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 335297
Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63385
||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 335298 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 335357
Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445
||| | ||| ||||| || |||| | | |||||||||||||||||| || |||| ||
Sbjct 335358 GTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 335417
Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63505
||||| | || || || | | |||||| || ||| | ||| || || ||
Sbjct 335418 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 335477
Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565
|| | |||||||| | || ||| || || ||||| || ||||| || ||| |||
Sbjct 335478 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 335537
Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63625
|| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 335538 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 335597
Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63685
| ||||| |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 335598 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 335657
Query 63686 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 335658 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 335717
Query 63746 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805
|||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| ||
Sbjct 335718 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 335777
Query 63806 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63865
|||||| || || |||| ||||| | ||| | ||||| | |||| |||
Sbjct 335778 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATC------TTT 335831
Query 63866 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 63918
||| | || | || || |||| ||||| || || || || | ||| | |
Sbjct 335832 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 335890
Query 63919 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 63978
| || || || | || | || || || | ||||| ||| | || | |||| ||
Sbjct 335891 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 335950
Query 63979 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64038
|||| | || || | ||| ||||| ||||| | | | || ||||| || || || |
Sbjct 335951 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 336010
Query 64039 TACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 64097
| || || ||| | |||| || |||| | || ||||| || || ||||| || | |
Sbjct 336011 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 336069
Query 64098 TA 64099
||
Sbjct 336070 TA 336071
>seq3
Length=1603786
Score = 179 bits (198), Expect = 5e-40
Identities = 575/881 (65%), Gaps = 12/881 (1%)
Strand=Plus/Minus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| || ||| | |||||||| ||||| ||||| || |||| || || |||
Sbjct 440149 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 440090
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
||||| || || || || || || || || || ||| || || || || |
Sbjct 440089 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 440030
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
| ||| || || || ||||| | ||| ||||||| ||| ||||| || | ||
Sbjct 440029 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 439970
Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251
||| || ||||| | | ||| | |||| ||| || || || ||||| || ||
Sbjct 439969 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 439911
Query 33252 AGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310
| || | | | | || | | | | | ||||| | || | |||||| || |
Sbjct 439910 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 439852
Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370
| ||| ||||| ||| || ||||| | ||| | |||||| || || || | || ||||
Sbjct 439851 AGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 439792
Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430
| | || ||| || | ||| || |||| ||| || || ||||| || || | ||||
Sbjct 439791 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTT 439732
Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---GTATCCA-C 33486
| || ||||| || |||| | ||| || | || ||| ||||| | ||||| |
Sbjct 439731 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATC 439672
Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546
| || ||||| | ||||| | ||| | || || ||||| |||||||| || |
Sbjct 439671 TAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAG 439613
Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606
| | | ||| ||| ||| || | ||||| || ||||| | ||| |||| ||
Sbjct 439612 AATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAG 439553
Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666
|| |||||||| || || || || ||||||||||| | || || | ||| || ||
Sbjct 439552 TGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACC 439493
Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726
|| | | | || |||| |||| ||||| ||||| || || || || ||||| |||
Sbjct 439492 TCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAAC 439433
Query 33727 GCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAATCATTG 33783
|| | || || ||| || | ||| ||| || || || ||||| ||||
Sbjct 439432 GCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGA 439373
Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843
| ||| || || | ||| | |||||| | |||||||| || ||||| || | |||||
Sbjct 439372 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 439313
Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
| |||||| || | || | ||||||||||| |||||
Sbjct 439312 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 439272
>seq5
Length=1351113
Score = 147 bits (162), Expect = 3e-30
Identities = 206/287 (72%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 63176 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63235
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 98550 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 98491
Query 63236 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63295
|||||||| ||||| ||||| |||| || || ||| || ||||| ||||||
Sbjct 98490 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 98431
Query 63296 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63354
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 98430 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATAT--ACAAAAG 98373
Query 63355 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63413
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 98372 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 98313
Query 63414 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63460
| ||| |||| | ||| ||||| ||||||| | || ||||||||
Sbjct 98312 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATA 98266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947137705280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |