Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq8 140 8e-28 seq1 100 7e-16 >seq8 Length=958696 Score = 140 bits (154), Expect = 8e-28 Identities = 1121/1777 (63%), Gaps = 80/1777 (5%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| ||| | ||| |||||| || || || ||| | ||| | || ||| | |||||| Sbjct 335738 ATCAACGGTAAGGTTGCTGAACGTCCTCAACACATGATCATGAGAGTGGCTGTCGGTATC 335679 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TT 363548 || | ||| |||| | | ||||| || || || | | || || || Sbjct 335678 CACGGTAGAGATATTGAAAAGGTTTTGGAAACTTACAACCTAATGTCT-CTAAGATACTT 335620 Query 363549 CACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTG 363608 ||| ||||| |||| ||| | | ||||||||| |||| | ||||||| ||||| || || Sbjct 335619 CACACACGCTTCGCCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATG 335560 Query 363609 CTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTG 363668 || || | |||||||| |||||||| || ||||| | ||||| | ||| | || Sbjct 335559 TTTCCTAGTGGCCATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATG 335500 Query 363669 TGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-AC 363727 ||| | || || |||| || || || |||||| | || ||||| ||||| | || Sbjct 335499 TGCCATGATCTCTAAGACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTAC 335440 Query 363728 AGAACAGTTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGT 363786 | ||||||| || || || |||| | || || | |||| ||| ||||| Sbjct 335439 CGGTTC-TTACATTGCTGGTACTAACGG-TACTTCTAACGGTATTATTCCAATGATTCGT 335382 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 || || |||| ||||| | ||||| ||||| ||||| ||| | || || || Sbjct 335381 GTTTTCAACAACACTGCTCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTC 335322 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 || |||| ||||||| || | ||||| || || || | || || | || ||| Sbjct 335321 GCCTTGTACATCGAGCCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAAC 335262 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 || || || ||| | |||||| | || ||||| ||||| ||| | | || | | Sbjct 335261 CACGGTAAGGAAGAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTT 335202 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAA--TTGGTCACTCTTTTGCCCACACGAATGTC 364024 || |||||| | || ||| | | | ||| |||| | | || | ||| ||||| | Sbjct 335201 TTCATGAAGAGAGTCGAG--AAGAACGAAGATTGGACTTTGTTCTCTCCAAACGAAGCAC 335144 Query 364025 CAGGTCTTTCC-GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCG 364083 |||| ||| || ||||| | ||||| || | || || | |||||| || || Sbjct 335143 CAGG-CTTACCAGATGTTTACGGTGATGAATTTGAAGCATTGTACGAACGTTACGA---- 335089 Query 364084 GAGGGAAAGGC----TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 ||| ||| | | | | ||||| | || || ||| | |||| || ||| |||| Sbjct 335088 GAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTACGCTATCTTGGA 335029 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 | || | || || || || || | ||| | ||||| ||| | || ||| ||| Sbjct 335028 AGCTCAAACCGAAACTGGTACCCCATTCATGCTATACAAGGATGCTTGTAACAAGAAGAG 334969 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259 || || || || | ||||| || || ||| | ||| || || ||||||| Sbjct 334968 TAATCAAAAGAACTTGGGTACTATCAAGTCTTCGAACTTGTGTTGTGAAATCGTTGAATA 334909 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | | || || || || || || |||||| | || || ||||| | || ||||| | Sbjct 334908 CTCTAACCCAGAAGAAACCGCTGTTTGTAACTTGGCTTCTATCGCTTTGCCAGCGTTCAT 334849 Query 364320 ---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACC---TATC- 364366 ||| ||||||| | | ||| || ||| | || || | |||| Sbjct 334848 TGAAATATCAAACGATGGTAAGACTCAA-ACCTACAACTTCAAGAAGTTGCACGATATCT 334790 Query 364367 ---ATGCT---ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTG 364420 | | | ||| |||| | ||| | || ||| || ||||||||| || | Sbjct 334789 CTAAGGTTTTGACTCGCAACTTGAACAGAATCATTGACCGTAACTATTATCCAGTT---G 334733 Query 364421 AAGCCG--AGC-GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCG 364477 || | | || | || || ||| | ||| | || |||| | ||||| || || | | Sbjct 334732 AAACTGCTAGAAGATCAAACATGAGACATAGACCTATTGCATTGGGTGTTCAAGGTTTAG 334673 Query 364478 CTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTC-GTGTTCTAAAT 364536 | |||| ||| |||||||| || ||||||| || || || | | | | || Sbjct 334672 CCGACGCTTTCATGATGCTACGTTTGCCATTTGACTCTGAAGAAGCAAAGAGAT-TGAAC 334614 Query 364537 AAGGAGATCTTTGAAACAATGTATTTTGCCGCAA-TGACTGCTTCGTGTGATTTGGCAAA 364595 | ||||||||||| || || || || ||| || | || || |||||||| Sbjct 334613 GTCCAAATCTTTGAAACTATCTACCATGGTGCTTGTGAAGCCTCCATG-GAATTGGCAAA 334555 Query 364596 A-ACCAAGGG--AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCA 364652 | |||| | | | ||| || ||| || || || | || || || || Sbjct 334554 GGAAGAAGGTCCATATGAATCT--TTCCCAGGC-TCTCCAGCATCTGAAGGTAAGTTACA 334498 Query 364653 GTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCC 364710 || ||||||||| | || ||| || || |||| | ||||||| | | | | Sbjct 334497 ATTCGATCTATGGGGTAAGACCCCAACTAACCTATGGGAATGGGATAACTTGAAGGCTGA 334438 Query 364711 AACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACA-GCGCCCATGCCCACGGCTTC 364769 || | ||| | || ||| | ||||| | ||| | || || ||||| || ||||| Sbjct 334437 AA--TCAAGCAACACGGTCTAAGAAACTCTTT-GTTGCTCGCTCCAATGCCAACCGCTTC 334381 Query 364770 TACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTC 364829 ||| | || ||| | || |||||||||| ||||| || | || ||| | || || Sbjct 334380 TACATCCCAAATCTTGGGTTACAACGAGTGTTTCGAGCCATACACTTCCAACATGTACTC 334321 Query 364830 ACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTC 364889 || || || | || || ||||| | | || || ||| | | ||| | Sbjct 334320 TCGTCGTGTGTTATCTGGTGAATTCCAAATCGTCAACCCTTACTTGCTACGTGATTTGGT 334261 Query 364890 CGACCGCGGGCTGTGGGGTGACAGC-ATGAAGAACTATATCATCGCCGCTAATGGTTCTG 364948 || || | |||| ||| ||| |||||| | |||||||||| | |||||||||| Sbjct 334260 TGATTTGGGTATTTGGGATGA-AGCTATGAAGTCCCATATCATCGCTGATAATGGTTCTA 334202 Query 364949 TGCAGAACATTCCAGGATTTCCAGAAGATCTGAA-GCCTATTTACAAAACCGTATGGGAA 365007 | || ||| | ||| | ||| |||| || || | || | ||||| || || |||||| Sbjct 334201 TCCAAAACTTGCCAAACATCCCACAAGAGCTAAAAGACT-TATACAAGACTGTTTGGGAA 334143 Query 365008 ATTTCCATGCGAACTCTCATT---GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAG 365064 || || || || | |||| |||||||| || || || | ||||| |||| ||| Sbjct 334142 ATATC---GCAAAAGCACATTATCGATATGGCCGCTGACCGTGCTGCTTATATCGATCAA 334086 Query 365065 AGCCAGTCGTTTAACGT----ATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCAT 365120 ||| ||||| ||| | |||| || | ||||| | ||| | || ||||| Sbjct 334085 TCCCAATCGTTGAACATTCACATTCGTGCC----CCAACTATGGGTAAGTTGACTTCCAT 334030 Query 365121 GCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 |||||||||||| ||||| ||| | ||||| ||| Sbjct 334029 GCATTTCTACGGATGGAAGAAGGGTTTGAAGACTGGT 333993 >seq1 Length=1734505 Score = 100 bits (110), Expect = 7e-16 Identities = 269/404 (67%), Gaps = 12/404 (3%) Strand=Plus/Minus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGG--AAGGGAATTGTCGAAGAACTTCTGT 111372 ||||||||||| || || ||| || | || ||||| ||| | || ||| | | Sbjct 874114 TTTCCACTTCTAACTACCAAG--AAAGTTTTCACCAAGGGTATTATTCTTGAGCTTTTAT 874057 Query 111373 GGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGG 111432 |||||||| || |||| ||| || |||| | | || ||| || || |||| Sbjct 874056 GGTTTATTTCTGGCTGTACTGATGGTAAGAAACTCTCTGATCAAGGTGTGAAGATCTGGG 873997 Query 111433 ATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACA-ACGAAGAAGGT 111491 | || || ||||| ||||| | | || || | || ||| || | ||| || ||| Sbjct 873996 AAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGACTTACAGATAGACGT-GAGGGT 873938 Query 111492 GATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATG 111551 ||| | ||||||||||| || || |||||| | || || || ||||| ||||| || ||| Sbjct 873937 GATTTGGGACCAGTTTATGGGTTCCAATGGAGACATTTCGGAGCAGAATACAAGAC-ATG 873879 Query 111552 CACGACTCATATGATTC---ACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATT 111608 ||| || |||| ||| || |||||| ||| |||| ||| || | | Sbjct 873878 T--GACGATGATTATTCGGGACAAGGTGTTGATCAGTTAAGCGATGTGATTCATAAGTTG 873821 Query 111609 AAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAA 111668 |||||||| || | | | ||||||||| ||||||||||| || || | Sbjct 873820 AAGAACAATCCTTACGATAGAAGGATTATTATGTCAGCATGGAACCCTCCTGATTTCCCA 873761 Query 111669 AAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 |||||||| ||||||||||| ||| | | | ||||| ||||| Sbjct 873760 AAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTCTATGT 873717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353466406256