Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8 273 3e-68 seq5 161 1e-34 >seq8 Length=958696 Score = 273 bits (302), Expect = 3e-68 Identities = 750/1139 (66%), Gaps = 14/1139 (1%) Strand=Plus/Plus Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882 ||||||| || || || || | |||||||||||| |||||||| |||||||| || || | Sbjct 334940 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 334999 Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 62942 ||||||| ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 335000 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 335059 Query 62943 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63000 | | | ||| || | | |||||| ||||| || |||||| ||| || || Sbjct 335060 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 335117 Query 63001 GTCTCCCCAAACAT-TGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059 || || |||||| || || || || ||| | ||| | | ||| | ||| ||| Sbjct 335118 ATCACCGTAAACATCTGGTAAG-CCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTT 335176 Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63119 ||| | || |||| ||||| || ||||| || ||||| || ||| || | |||| Sbjct 335177 CGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTC 335236 Query 63120 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63179 | | | ||| || || || |||||| | | |||| ||| | | ||||| | Sbjct 335237 TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTG 335296 Query 63180 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63239 | ||||| || || | ||| | ||| | | ||||| | ||||| || || || || | Sbjct 335297 AGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAA 335356 Query 63240 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 63299 ||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| | Sbjct 335357 CGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGT 335416 Query 63300 TGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 63359 | || || | || || || | | |||||| || ||| | ||| || || | Sbjct 335417 TAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCAC 335476 Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419 | || | |||||||| | || ||| || || || || || || || || || || Sbjct 335477 CAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAAT 335536 Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479 | ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| | Sbjct 335537 CTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGA 335596 Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539 | | ||||| |||||||| || || || || ||| | ||| ||||| || || | | Sbjct 335597 AAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAA 335656 Query 63540 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63599 | || ||||| | || || || || || || | ||| | |||||| ||||| | Sbjct 335657 CCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 335716 Query 63600 TTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63659 |||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| | Sbjct 335717 GTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGA 335776 Query 63660 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 63719 | |||||| || || |||| ||||| | ||| | ||||| | |||| || | | Sbjct 335777 AGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCT 335836 Query 63720 TGTTAACTA---CATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAG 63776 | || | ||| || | || | ||||| ||||| | || | ||| | || | Sbjct 335837 CCATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTG 335893 Query 63777 GATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGT 63836 | ||||| | || | || || || | ||||| ||| | || | |||| |||| Sbjct 335894 GGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGT 335953 Query 63837 GTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTAC 63896 | | || || | ||| ||||||||||| | | | || ||||| || || || || | Sbjct 335954 GCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-C 336012 Query 63897 AAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954 | || ||| | |||| || |||| | || ||||| || || |||||||| | ||| Sbjct 336013 ATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 336071 >seq5 Length=1351113 Score = 161 bits (178), Expect = 1e-34 Identities = 209/287 (73%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 63031 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63090 |||||| |||| | | ||||| ||| | | || | || |||| |||||| ||||| Sbjct 98550 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 98491 Query 63091 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63150 |||||||| ||||| ||||| |||| || || ||| || ||||| |||||| Sbjct 98490 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 98431 Query 63151 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63209 | | || | | ||| | |||||||| |||||| |||||||||||||| || || Sbjct 98430 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATA--CAAAAG 98373 Query 63210 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63268 | ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | | Sbjct 98372 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 98313 Query 63269 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315 | ||| |||| | |||||| || |||||||| | |||||||||||| Sbjct 98312 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATA 98266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631936636800