Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq8 273 3e-68
seq5 161 1e-34
>seq8
Length=958696
Score = 273 bits (302), Expect = 3e-68
Identities = 750/1139 (66%), Gaps = 14/1139 (1%)
Strand=Plus/Plus
Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882
||||||| || || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 334940 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 334999
Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 62942
||||||| ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 335000 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 335059
Query 62943 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63000
| | | ||| || | | |||||| ||||| || |||||| ||| || ||
Sbjct 335060 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 335117
Query 63001 GTCTCCCCAAACAT-TGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059
|| || |||||| || || || || ||| | ||| | | ||| | ||| |||
Sbjct 335118 ATCACCGTAAACATCTGGTAAG-CCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTT 335176
Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63119
||| | || |||| ||||| || ||||| || ||||| || ||| || | ||||
Sbjct 335177 CGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTC 335236
Query 63120 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63179
| | | ||| || || || |||||| | | |||| ||| | | ||||| |
Sbjct 335237 TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTG 335296
Query 63180 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63239
| ||||| || || | ||| | ||| | | ||||| | ||||| || || || || |
Sbjct 335297 AGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAA 335356
Query 63240 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 63299
||| | ||| ||||| || |||| | | ||||||||||||||| || || ||||| |
Sbjct 335357 CGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGT 335416
Query 63300 TGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 63359
| || || | || || || | | |||||| || ||| | ||| || || |
Sbjct 335417 TAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCAC 335476
Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419
| || | |||||||| | || ||| || || || || || || || || || ||
Sbjct 335477 CAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAAT 335536
Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479
| ||| ||||| | ||| ||||| |||||||| || || ||| || ||||| |
Sbjct 335537 CTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGA 335596
Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539
| | ||||| |||||||| || || || || ||| | ||| ||||| || || | |
Sbjct 335597 AAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAA 335656
Query 63540 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63599
| || ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 335657 CCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 335716
Query 63600 TTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63659
|||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| |
Sbjct 335717 GTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGA 335776
Query 63660 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 63719
| |||||| || || |||| ||||| | ||| | ||||| | |||| || | |
Sbjct 335777 AGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCT 335836
Query 63720 TGTTAACTA---CATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAG 63776
| || | ||| || | || | ||||| ||||| | || | ||| | || |
Sbjct 335837 CCATGACGATGTCATACA-CCTCATCC--GAAATCATAGGCGAGTGAATACCAGTCTTTG 335893
Query 63777 GATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGT 63836
| ||||| | || | || || || | ||||| ||| | || | |||| ||||
Sbjct 335894 GGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGT 335953
Query 63837 GTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTAC 63896
| | || || | ||| ||||||||||| | | | || ||||| || || || || |
Sbjct 335954 GCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-C 336012
Query 63897 AAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954
| || ||| | |||| || |||| | || ||||| || || |||||||| | |||
Sbjct 336013 ATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 336071
>seq5
Length=1351113
Score = 161 bits (178), Expect = 1e-34
Identities = 209/287 (73%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 63031 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63090
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 98550 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 98491
Query 63091 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63150
|||||||| ||||| ||||| |||| || || ||| || ||||| ||||||
Sbjct 98490 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 98431
Query 63151 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63209
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 98430 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATA--CAAAAG 98373
Query 63210 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63268
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 98372 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 98313
Query 63269 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315
| ||| |||| | |||||| || |||||||| | ||||||||||||
Sbjct 98312 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATA 98266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631936636800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |