Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2 109 1e-18 >seq2 Length=1698977 Score = 109 bits (120), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| || || | ||||||||||||||| || || || || Sbjct 909475 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAA 909416 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||||| || ||||| || || || || || | ||||| Sbjct 909415 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCAC 909359 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| ||||| || |||| |||||| Sbjct 909358 ATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 909299 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 909298 GACGAAGATTTGCAT 909284 Score = 107 bits (118), Expect = 5e-18 Identities = 142/196 (72%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| || || | ||||||||||||||| || || || || Sbjct 909019 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAA 908960 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||| || || ||||| ||||| ||||| || | ||||| Sbjct 908959 AATCAATCTTTGTTG---GTCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCAC 908903 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| ||||| || || | ||||| Sbjct 908902 ATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTT 908843 Query 288459 GACGAATATCTGCATT 288474 ||| || || |||||| Sbjct 908842 GACAAAGATTTGCATT 908827 Score = 105 bits (116), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||||| || || | |||||||||||||||||| || || || Sbjct 909247 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAA 909188 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||||| || ||||| || || || || || | ||||| Sbjct 909187 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCAC 909131 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| || || || |||| |||||| Sbjct 909130 ATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTT 909071 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 909070 GACGAAGATTTGCAT 909056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654279085424