Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq8 197 2e-45 seq3 95.1 1e-14 >seq8 Length=958696 Score = 197 bits (218), Expect = 2e-45 Identities = 891/1399 (64%), Gaps = 31/1399 (2%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || || |||| ||||||||||| || ||||| |||| |||||||||||||| || || Sbjct 334324 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAA 334383 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| || || | | | ||| | ||||| | || | | || || Sbjct 334384 GCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 334443 Query 114062 TTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTG-TCTCCCCCTGCCACATATCAAACTGG 114118 || | | ||||| || ||| | || | | ||| ||| || | ||| || || Sbjct 334444 TTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACCC---CATAGATCGAATTGT 334500 Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178 | |||||| || ||||| || || || | || ||||| || || ||| ||| Sbjct 334501 AACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCC 334560 Query 114179 AATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 ||||| |||| || || || | || || || || ||||| || | | ||| Sbjct 334561 AATTCCATGGAG---GCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTC 334617 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | | ||| || || || || ||||| | | || || || || | || || | | Sbjct 334618 AATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 334677 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 114355 ||||| ||||| | |||| || | ||||||||| || || ||| ||| || || || Sbjct 334678 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 334737 Query 114356 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 114415 |||||| | || | || || | || || | || || | |||||| | ||| || Sbjct 334738 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 334797 Query 114416 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG-- 114469 || | ||| | | | | | | |||||| ||| | ||| || | ||| | Sbjct 334798 TGCAACTTCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCT 334857 Query 114470 ------GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 ||||| || |||| ||||| |||| ||| || || | || ||| || | Sbjct 334858 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 334917 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 ||||| |||||| || ||| ||| || || ||||||||||||||||| ||| || Sbjct 334918 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 334977 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 ||||| ||||||||||| |||||| |||| || || || || ||||| | | | ||| Sbjct 334978 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 335037 Query 114644 GCCTTCCA-GACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 114702 || | ||| || | | | || | ||||| | | || || || |||||| Sbjct 335038 GCGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACG 335096 Query 114703 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 114762 | ||| | |||||||| || ||||| | |||| | |||||||| | | ||| Sbjct 335097 TTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGG 335156 Query 114763 GCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCA 114822 |||| | || ||| | | || ||| || | ||||||||| || ||||||||||| Sbjct 335157 AGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCA 335216 Query 114823 GAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 114882 || |||| ||| | || | || |||||| | || || || | | || Sbjct 335217 TAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTC 335276 Query 114883 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTAC 114941 | ||||| | |||||| | |||||| || || | ||||| |||| | ||| | Sbjct 335277 GACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCT 335336 Query 114942 GACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999 | |||| | |||| || || | || ||| || || || |||| ||||||||| Sbjct 335337 CTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAAT 335396 Query 115000 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATG 115059 ||||| | ||| || || || || ||| ||| | | | | | || Sbjct 335397 AATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTG 335456 Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119 ||||||| ||||||||| || || ||| ||||| || || ||| | | | || | Sbjct 335457 AATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTC 335516 Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 ||| || || || || || || |||| | || | ||||| || ||||||||||| Sbjct 335517 GTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGG 335576 Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GGGACA 115238 || |||||||| ||||| || || || | ||||| |||| || ||| | |||| Sbjct 335577 ATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTTAGAGACA 335635 Query 115239 TCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 115298 | | ||| || ||||| || ||| ||| ||||| ||||||| | || | Sbjct 335636 TTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTC 335695 Query 115299 GCATAAACATGTATTGGGG 115317 ||| | ||||| ||| || Sbjct 335696 TCATGATCATGTGTTGAGG 335714 >seq3 Length=1603786 Score = 95.1 bits (104), Expect = 1e-14 Identities = 345/528 (65%), Gaps = 19/528 (4%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | ||| || || | | | || | ||| || |||||| || || Sbjct 439856 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 439797 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||| | |||| ||||||||||||||| || ||| ||| ||||| ||||| || | Sbjct 439796 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACAC 439737 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC-AA 126224 || ||||| |||||||||| | | ||||| | || || | | | | || Sbjct 439736 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAGGGCTTCGTCATCACGAA 439678 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCA 126283 ||| | || ||||| || ||||||| | ||| || | ||| | || || |||| Sbjct 439677 TCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCA 439618 Query 126284 --AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 126341 |||| ||| | || || | ||||| |||||||| | || || | ||||| | Sbjct 439617 ACAAGAATTCGT--GTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAACGAATAAG 439561 Query 126342 TTTCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 126400 ||||| ||||| ||| ||| || || || |||||||| | ||||| Sbjct 439560 TTTCGGAGTGGATGTTTTCCATCATAATTTGGAAAC-CGTAGAAACACTTGGCTTCTGGA 439502 Query 126401 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 126460 || || |||||| | | || || | | || || || || |||||||| || Sbjct 439501 ATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCA 439442 Query 126461 GCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTC 126514 ||||| ||||| || | | | | | ||| || || |||||||||| | | Sbjct 439441 GCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTC---TCGTTCTCGTTCATTCTGTTG 439385 Query 126515 TTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 126562 |||||||| | ||||||||| || | ||| | || || ||||||||| Sbjct 439384 TTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 439337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353540264640