Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 seq8 89.7 5e-13 >seq2 Length=1698977 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| |||| || ||||| |||||||||||||| || | Sbjct 909283 ACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGA 909224 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| | || || || ||| |||| | | || ||||| ||||| Sbjct 909223 TAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGG 909164 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| || | || ||| | || || Sbjct 909163 AATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAAC 909104 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | ||| ||||| |||||||| || ||||| |||||||| Sbjct 909103 TTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 909056 Score = 102 bits (112), Expect = 8e-17 Identities = 166/238 (70%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| |||| || ||||| ||||| |||||||| || | Sbjct 909055 ACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGA 908996 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| | ||||| || ||| |||| | | || ||||| ||||| Sbjct 908995 TAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGG 908936 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| || | || ||| | || || Sbjct 908935 AATACCTTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAAC 908876 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAATG 64453 ||| | ||| | |||||| || || || || || || || ||||||||||| ||||| Sbjct 908875 TTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTTT--TAATG 908820 >seq8 Length=958696 Score = 89.7 bits (98), Expect = 5e-13 Identities = 167/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 155211 GCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAG 155270 ||||| ||| |||||| ||||| || |||| ||| ||||| |||| | || | | Sbjct 335497 GCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGG 335556 Query 155271 AAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGT 155330 ||||| || || | ||| || ||||| || || || | |||||| ||||||| Sbjct 335557 AAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGT 335616 Query 155331 GTAAAC-ATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACC 155389 || || || || | | ||| |||||||||||| | | ||||| || | ||| Sbjct 335617 GTGAAGTATCTTAGAGACA-TTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACC 335675 Query 155390 GTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTT 155449 ||| ||||||| ||||| | ||| | |||||||||| || || ||||| ||||| Sbjct 335676 GTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTTACCGTT 335735 Query 155450 GAT 155452 ||| Sbjct 335736 GAT 335738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644750035520