Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 2e-23
seq2 104 2e-17
seq3 95.1 1e-14
>seq5
Length=1351113
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || |||||||||||||| || || || | ||| || |
Sbjct 1192838 CTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCA 1192779
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 1192778 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 1192719
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||||||||| |||||||| | ||||
Sbjct 1192718 TCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATA 1192659
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343
|| || || ||||| || || || ||||||||||| ||
Sbjct 1192658 GTCTTACCAGTTAGGGTCTTGACGAAAATTTGCATGGC 1192621
>seq2
Length=1698977
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| || || || ||||||||||| || || || ||| | ||| |
Sbjct 909270 CTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCG 909211
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || |||||||| || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 909210 TCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 909151
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || || | || | ||||| ||||| || ||||| | ||| |
Sbjct 909150 TCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 909091
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| || | ||| || || || ||||||||
Sbjct 909090 GTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 909056
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| || || || |||||||||||||| || || ||| | ||| |
Sbjct 909042 CTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCG 908983
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || || | ||||||| ||| ||||| || ||||| ||||| |||
Sbjct 908982 TCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTA 908923
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || || | || | ||||| ||||| || ||||| | ||| |
Sbjct 908922 TCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 908863
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| || || ||||| ||||||||
Sbjct 908862 GTCTTACCTGTTAACGTCTTGACAAAGATTTGCAT 908828
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| | | |||||| || | || || || |||||||||||||| || || |||
Sbjct 909510 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 909451
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| | || || ||||| || || || | ||||||| ||| ||||| || |||
Sbjct 909450 AGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 909391
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| || |||||||| || || | || | ||||| ||||| ||||||
Sbjct 909390 ATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACT 909331
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| | ||| | || || || || | ||| || || || ||||||||
Sbjct 909330 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 909284
>seq3
Length=1603786
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| ||||| || | || || || |||||||||||||| || || || | ||| ||
Sbjct 1548440 AGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTA 1548499
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| |||||||| || || || | ||||||| ||| ||||| || ||||| |||||
Sbjct 1548500 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 1548559
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
|| |||||||| || |||| || | |||||| ||||| |||||||| | |||
Sbjct 1548560 TTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTG 1548619
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAA 45332
| || || || || | || || || |||
Sbjct 1548620 ATGGTCTTACCAGTCAAGGTCTTGACGAAA 1548649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003154799680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |