Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq8 210 3e-49 seq3 100 3e-16 >seq8 Length=958696 Score = 210 bits (232), Expect = 3e-49 Identities = 895/1401 (64%), Gaps = 35/1401 (2%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || ||||||| ||||||||||| || ||||| |||| |||||||||||||| ||| || Sbjct 334324 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAA 334383 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| || || | | | ||| | ||||| | | || || Sbjct 334384 GCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 334443 Query 116023 TTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080 || | | ||||| || ||| | || || | || | |||| | ||| || || | Sbjct 334444 TTCAAGTTATCCCATTCCCATAGGTTAG-TTGGGGTCTTAC-CCCATAGATCGAATTGTA 334501 Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140 |||||| || ||||| || || || | |||||||| || || ||| |||| Sbjct 334502 ACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCCA 334561 Query 116141 ATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 116197 |||| |||| || || || | || || || || ||||| || | | |||| Sbjct 334562 ATTCCATGGAG---GCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTCA 334618 Query 116198 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGAC 116257 | ||| || || || || ||||| | | ||| || || || | || || | || Sbjct 334619 ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAAC 334678 Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGG 116317 |||| ||||| | |||| || | ||||||||| || || ||| ||| || || || | Sbjct 334679 CTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACTG 334738 Query 116318 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 116377 ||||| | || | || || | || || | || || | |||||| | ||| || | Sbjct 334739 GATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCGT 334798 Query 116378 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG--- 116430 | | ||| | | | | | | |||||| ||| | ||| || | ||| | Sbjct 334799 GCAACTTCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCTG 334858 Query 116431 -----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 116485 ||||| || |||| ||||| |||| ||| || || | || ||| || | | Sbjct 334859 GCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGA 334918 Query 116486 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 116545 |||| |||||| || ||| ||| || || ||||||||||||||||| ||| ||| Sbjct 334919 TTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGT 334978 Query 116546 TACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 116605 |||| ||||||||||| ||||| |||| || || || || ||||| | | | |||| Sbjct 334979 TACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAG 335038 Query 116606 CCTTCCA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 116664 | | ||| || | | | || | ||||| | | || || || |||||| | Sbjct 335039 CGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGT 335097 Query 116665 GTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGA 116724 ||| | || ||||| || ||||| | | |||| | |||||||| | | |||| Sbjct 335098 TCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGA 335157 Query 116725 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 116784 |||| | || ||| | | || ||| || | ||||||||| || ||||||||||| Sbjct 335158 GAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCAT 335217 Query 116785 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844 || || | ||| | || | || |||||| | || || || | | || Sbjct 335218 AGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCG 335277 Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCC 116898 | ||||| | |||||| | |||||| || || | ||||| |||| | || | | Sbjct 335278 ACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTC 335337 Query 116899 TTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958 ||| |||| | |||| || || | || || ||| || || |||| ||||||| Sbjct 335338 TTG---TTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGA 335394 Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCG 117018 || ||||| | ||| || || || || ||| ||| | | | | | | | Sbjct 335395 ATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTG 335454 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 || ||||||| ||||||||| || || ||| ||||| || || ||| | | | || Sbjct 335455 TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTG 335514 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 |||| || || || || || || |||| | || | ||||| || ||||||||| Sbjct 335515 TCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGT 335574 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GGGA 117197 || || |||||||| ||||| || || || | ||||| |||| || ||| | || Sbjct 335575 GGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTTAGAGA 335633 Query 117198 CATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGAC 117257 ||| | ||| || ||||| || ||| ||| ||||| ||||||| | || Sbjct 335634 CATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCAC 335693 Query 117258 CCGCATAAACATGTATTGGGG 117278 | ||| | ||||| ||| || Sbjct 335694 TCTCATGATCATGTGTTGAGG 335714 >seq3 Length=1603786 Score = 100 bits (110), Expect = 3e-16 Identities = 348/530 (66%), Gaps = 25/530 (5%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||| || || | | | || | ||| || |||||| || |||| Sbjct 439855 GCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCT 439796 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | |||| ||||||||||||||| || ||| ||| || |||||||| || | Sbjct 439795 GGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACA 439736 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATC--- 127695 || ||||| |||||||||| | | || || | | ||| ||| || ||| Sbjct 439735 CCTTCCACGGCAGCGAACGCAACCAATCTTTCAGC---GTATAGGG-CTTCGTCATCACG 439680 Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TT 127754 || ||| | || ||||| || ||||||| | ||| ||| | ||| | || || || Sbjct 439679 AATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATT 439620 Query 127755 CA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 127812 || |||| ||| | || || | ||||| |||||||| | || || | ||||| Sbjct 439619 CAACAAGAATTCGT--GTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAACGAATA 439563 Query 127813 TGTTTCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 127871 |||||| ||||| ||| ||| || || || |||||||| | ||||| Sbjct 439562 AGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAAC-CGTAGAAACACTTGGCTTCTG 439504 Query 127872 TTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 127931 || || |||||| | | || || | | || || || || |||||||| Sbjct 439503 GAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAG 439444 Query 127932 CAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 127985 ||||||| ||||| || | | | | | ||| || || |||||||||| | Sbjct 439443 CAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTC---TCGTTCTCGTTCATTCTGT 439387 Query 127986 TCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAA 128035 | |||||||| | |||||||| || | ||| | || || ||||||||| Sbjct 439386 TGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 439337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507138649280