Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq8 210 3e-49
seq3 100 3e-16
>seq8
Length=958696
Score = 210 bits (232), Expect = 3e-49
Identities = 895/1401 (64%), Gaps = 35/1401 (2%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|| ||||||| ||||||||||| || ||||| |||| |||||||||||||| ||| ||
Sbjct 334324 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAA 334383
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || ||||| || || | | | ||| | ||||| | | || ||
Sbjct 334384 GCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 334443
Query 116023 TTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080
|| | | ||||| || ||| | || || | || | |||| | ||| || || |
Sbjct 334444 TTCAAGTTATCCCATTCCCATAGGTTAG-TTGGGGTCTTAC-CCCATAGATCGAATTGTA 334501
Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140
|||||| || ||||| || || || | |||||||| || || ||| ||||
Sbjct 334502 ACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCCA 334561
Query 116141 ATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 116197
|||| |||| || || || | || || || || ||||| || | | ||||
Sbjct 334562 ATTCCATGGAG---GCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTCA 334618
Query 116198 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGAC 116257
| ||| || || || || ||||| | | ||| || || || | || || | ||
Sbjct 334619 ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAAC 334678
Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGG 116317
|||| ||||| | |||| || | ||||||||| || || ||| ||| || || || |
Sbjct 334679 CTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACTG 334738
Query 116318 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 116377
||||| | || | || || | || || | || || | |||||| | ||| || |
Sbjct 334739 GATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCGT 334798
Query 116378 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG--- 116430
| | ||| | | | | | | |||||| ||| | ||| || | ||| |
Sbjct 334799 GCAACTTCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCTG 334858
Query 116431 -----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 116485
||||| || |||| ||||| |||| ||| || || | || ||| || | |
Sbjct 334859 GCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGA 334918
Query 116486 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 116545
|||| |||||| || ||| ||| || || ||||||||||||||||| ||| |||
Sbjct 334919 TTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGT 334978
Query 116546 TACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 116605
|||| ||||||||||| ||||| |||| || || || || ||||| | | | ||||
Sbjct 334979 TACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAG 335038
Query 116606 CCTTCCA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 116664
| | ||| || | | | || | ||||| | | || || || |||||| |
Sbjct 335039 CGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGT 335097
Query 116665 GTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGA 116724
||| | || ||||| || ||||| | | |||| | |||||||| | | ||||
Sbjct 335098 TCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGA 335157
Query 116725 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 116784
|||| | || ||| | | || ||| || | ||||||||| || |||||||||||
Sbjct 335158 GAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCAT 335217
Query 116785 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844
|| || | ||| | || | || |||||| | || || || | | ||
Sbjct 335218 AGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCG 335277
Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCC 116898
| ||||| | |||||| | |||||| || || | ||||| |||| | || | |
Sbjct 335278 ACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTC 335337
Query 116899 TTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958
||| |||| | |||| || || | || || ||| || || |||| |||||||
Sbjct 335338 TTG---TTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGA 335394
Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCG 117018
|| ||||| | ||| || || || || ||| ||| | | | | | | |
Sbjct 335395 ATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTG 335454
Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078
|| ||||||| ||||||||| || || ||| ||||| || || ||| | | | ||
Sbjct 335455 TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTG 335514
Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138
|||| || || || || || || |||| | || | ||||| || |||||||||
Sbjct 335515 TCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGT 335574
Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GGGA 117197
|| || |||||||| ||||| || || || | ||||| |||| || ||| | ||
Sbjct 335575 GGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTTAGAGA 335633
Query 117198 CATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGAC 117257
||| | ||| || ||||| || ||| ||| ||||| ||||||| | ||
Sbjct 335634 CATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCAC 335693
Query 117258 CCGCATAAACATGTATTGGGG 117278
| ||| | ||||| ||| ||
Sbjct 335694 TCTCATGATCATGTGTTGAGG 335714
>seq3
Length=1603786
Score = 100 bits (110), Expect = 3e-16
Identities = 348/530 (66%), Gaps = 25/530 (5%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| | ||| || || | | | || | ||| || |||||| || ||||
Sbjct 439855 GCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCT 439796
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||| | |||| ||||||||||||||| || ||| ||| || |||||||| || |
Sbjct 439795 GGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACA 439736
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATC--- 127695
|| ||||| |||||||||| | | || || | | ||| ||| || |||
Sbjct 439735 CCTTCCACGGCAGCGAACGCAACCAATCTTTCAGC---GTATAGGG-CTTCGTCATCACG 439680
Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TT 127754
|| ||| | || ||||| || ||||||| | ||| ||| | ||| | || || ||
Sbjct 439679 AATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATT 439620
Query 127755 CA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 127812
|| |||| ||| | || || | ||||| |||||||| | || || | |||||
Sbjct 439619 CAACAAGAATTCGT--GTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAACGAATA 439563
Query 127813 TGTTTCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 127871
|||||| ||||| ||| ||| || || || |||||||| | |||||
Sbjct 439562 AGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAAC-CGTAGAAACACTTGGCTTCTG 439504
Query 127872 TTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 127931
|| || |||||| | | || || | | || || || || ||||||||
Sbjct 439503 GAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAG 439444
Query 127932 CAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 127985
||||||| ||||| || | | | | | ||| || || |||||||||| |
Sbjct 439443 CAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTC---TCGTTCTCGTTCATTCTGT 439387
Query 127986 TCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAA 128035
| |||||||| | |||||||| || | ||| | || || |||||||||
Sbjct 439386 TGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 439337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507138649280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |