Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2 172 1e-37 seq5 170 4e-37 seq3 168 1e-36 >seq2 Length=1698977 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| || | ||| || ||||| || ||||| || ||||| |||| |||||||| || Sbjct 909498 CTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCG 909439 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| | |||||||| || || || | || |||||||||||||||||| ||||| ||| Sbjct 909438 TCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 909379 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 |||||||| || ||| || || ||||| ||||| ||| ||| ||||| | || | Sbjct 909378 TCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATA 909319 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||||||||| || ||||| | |||||| Sbjct 909318 GTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 909284 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||| || || || |||||||| ||||| |||| ||||| Sbjct 909277 TCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGT 909218 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | || ||||| || || || | || |||||||||||||||||| || Sbjct 909217 TCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACC 909158 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || ||| || || ||||| ||||| ||| ||| ||||| | Sbjct 909157 TTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAA 909098 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||||||||| || ||||| | |||||| Sbjct 909097 AGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 909056 Score = 156 bits (172), Expect = 9e-33 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||| || || || ||||| || ||||| |||| ||||| Sbjct 909049 TCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGT 908990 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| || || || | || |||||||||||||||||| || Sbjct 908989 TCTTCCGTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACC 908930 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || ||||| || || ||| || || ||||| ||||| ||| ||| ||||| | Sbjct 908929 TTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAA 908870 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | ||||| ||||| || || || || || | |||||||| Sbjct 908869 AGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTT 908826 >seq5 Length=1351113 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||| || || || ||||| || ||||| || | | ||| Sbjct 1192845 TCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGT 1192786 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| || ||||| | || |||||||||||||||||| || Sbjct 1192785 TCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACC 1192726 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| | Sbjct 1192725 TTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAA 1192666 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || | || || ||||| | |||||| Sbjct 1192665 GGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1192624 >seq3 Length=1603786 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||||||| || | |||||| ||||| || ||||| || ||||| || | | ||| Sbjct 1548436 TCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGT 1548495 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| || ||||| | || |||||||||||| ||||| || Sbjct 1548496 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACC 1548555 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || |||||| || ||||||||||| ||| ||| ||||| | Sbjct 1548556 TTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAA 1548615 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || ||||| || || ||||| Sbjct 1548616 AGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 1548648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481486278136