Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq3 158 1e-33 >seq3 Length=1603786 Score = 158 bits (174), Expect = 1e-33 Identities = 537/826 (65%), Gaps = 23/826 (3%) Strand=Plus/Minus Query 36885 TTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTT 36944 ||||| || ||| |||| ||||||| ||||| || || || | | || || ||| Sbjct 440149 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 440090 Query 36945 TCCATAAAATCAAATGGATTAGA-----TGTATTATATATAGTACTACATGATAATTCCT 36999 |||||||| || ||||| |||| |||| ||| | | || ||| | || | Sbjct 440089 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGT--TACCT---AAAGCAA 440035 Query 37000 TCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAA 37059 ||| || || || ||||||||||| | ||||| ||| | ||| ||| ||||| | Sbjct 440034 CCAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCA 439975 Query 37060 TTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTA 37118 ||| || || | || || ||||| | | ||||| || ||||| ||| | Sbjct 439974 ATAGAGAAACGGGTAGAGCGTCGATGAAGTA-TCTCTTTTCGATCTCAACAGCTTCTGTG 439916 Query 37119 ACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTT--AAATATTTAAACAATAAAC 37176 | || | | | || |||| | | || | || | |||| | || | |||| Sbjct 439915 ATGATTCTTTCGACAA--TCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAAC 439858 Query 37177 ATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATC 37236 | ||||| || || |||||||||||||| | |||||||| || || ||||| || | Sbjct 439857 AGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAAC 439798 Query 37237 CTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAA 37296 ||||||| ||||| | || || | ||| || || || ||||| || ||||| || || | Sbjct 439797 CTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACA 439738 Query 37297 TACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACT--ATAATCAGA 37354 |||||| || || || || || || | | | | || | | | || | |||| Sbjct 439737 CACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA--TAGGGCTTCGTCATCACG 439680 Query 37355 AATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTT 37414 ||||||| | | | ||| | |||||| ||| | | ||| |||||||| || || Sbjct 439679 AATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATT 439620 Query 37415 TAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACAT 37474 || | || | | ||| | | ||| | || ||||| ||||| | || ||| | Sbjct 439619 CAACAAGAATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGT 439560 Query 37475 TTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAA 37534 ||| ||||| || ||||| || || || ||||| || |||||| | ||||| | | Sbjct 439559 TTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAAT 439500 Query 37535 TTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGC 37594 ||| || || | | || | | | |||||||| || || || ||||| ||| || Sbjct 439499 TTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGC 439440 Query 37595 AAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAAT-TTTTTCCA 37651 |||||| ||||| || || ||| ||| || | | || || | || ||||| Sbjct 439439 AAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCA 439380 Query 37652 ATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 |||| || ||| || || ||||| | ||| ||| | ||||||||| Sbjct 439379 GTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAA 439334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316740768320