Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq5 122 7e-23
seq2 109 5e-19
seq3 93.3 4e-14
>seq5
Length=1351113
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || || || |||| ||||| || |||||| ||| ||| ||||
Sbjct 1192624 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 1192683
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | || ||||| || ||| ||||| || || | || ||| |||
Sbjct 1192684 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1192743
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | |||||||| || || |||||||||||| || |||| || | || || |||
Sbjct 1192744 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1192803
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|| ||||| |||||||| || ||| |||| || ||||| |||| ||
Sbjct 1192804 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 1192850
>seq2
Length=1698977
Score = 109 bits (120), Expect = 5e-19
Identities = 165/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 28549 TAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAAC 28608
||||||||||||| ||||| || || ||||| ||||| ||||| || ||| |||
Sbjct 908823 TAAAAATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAAT 908882
Query 28609 CTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAG 28668
|||| || || | | | || | ||| || ||| || || || || | || ||
Sbjct 908883 CTTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCAG 908942
Query 28669 ATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 28728
| ||||| ||| | || |||||||| || ||||| ||||| | |||| | |||| |
Sbjct 908943 ACCAACAAAGATTGATTTTTGCGGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGACT 909002
Query 28729 ATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
| ||||| ||||| |||||||| || ||| | || || ||||| |||| || ||
Sbjct 909003 ACAACATCCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGGTAT 909057
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || || || || || || |||||||| || ||| ||| ||||
Sbjct 909056 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCT 909115
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | || | ||| || || ||||| || || | || ||| |||
Sbjct 909116 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 909175
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | || ||||| || |||||||| ||||| | |||| | |||| || |||
Sbjct 909176 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 909235
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||| |||||||| || ||| | || || ||||| |||| || ||
Sbjct 909236 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGGTAT 909285
>seq3
Length=1603786
Score = 93.3 bits (102), Expect = 4e-14
Identities = 155/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
|| || || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 1548648 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATT 1548589
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | || ||||| || || ||||| || || | || ||| ||||| ||| |
Sbjct 1548588 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTG 1548529
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || || ||||||||||| || |||| || | || || ||||| |||||
Sbjct 1548528 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAG 1548469
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| || || ||| |||| || ||| || |||| || || ||
Sbjct 1548468 GAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGGTATTAT 1548425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404758523032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |