Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 165 4e-36 seq8 150 9e-32 >seq5 Length=1351113 Score = 165 bits (182), Expect = 4e-36 Identities = 186/248 (75%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 25901 AAATG--CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTG 25958 ||||| |||||| |||| | ||||| | |||||| | ||| |||||||| | | Sbjct 98536 AAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAG 98477 Query 25959 CATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGA 26018 |||||||||| |||| || ||||||||||||||||||||||||||| |||| | ||||| Sbjct 98476 CATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGA 98417 Query 26019 AATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTC 26078 | |||| |||||| ||||||||||| || || ||| ||| ||| | ||| Sbjct 98416 AGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGT 98357 Query 26079 CTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATC 26138 ||||||||||| || |||||||| || | || ||||| || ||| |||||||| | Sbjct 98356 TCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAAC 98297 Query 26139 CAGTTGAA 26146 || ||||| Sbjct 98296 CATTTGAA 98289 Score = 125 bits (138), Expect = 4e-24 Identities = 365/545 (67%), Gaps = 23/545 (4%) Strand=Plus/Minus Query 24648 TATTTTCTTTTTCTAATGTAAATTGCTTAGCT-GATACTGCTGGTTTAGTTCTAAGATAA 24706 ||||||| | | || |||||||| |||| || | |||| | ||||||||||||| Sbjct 99781 TATTTTCATCATTCAAAGTAAATTGTATAGCACGAGAA-GCTGCCTGAGTTCTAAGATAA 99723 Query 24707 TACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCA 24766 ||||| || || |||||| ||||||||| | ||||| ||||||||||||| |||| | Sbjct 99722 TACATCCCTGTCTTCAATCCCTTCTTCCATGCATAAAAGTGCATTGATGTTAATTTTCCC 99663 Query 24767 AT-GTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCT 24825 || ||| | | | | ||| ||||||| | || |||| || || || | ||| Sbjct 99662 ATAGTTGGTTCACGC-AAATACAAGTTTAGAGACTGAGACTGATCAATGAATGGAGCTCT 99604 Query 24826 ATCTGCAGCTAAG-TCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTAT-CTC 24883 |||| | | ||| || || | |||| || || || || | ||||||||| | Sbjct 99603 ATCT-CTGGAAAGATCGATCAATTTTTTTTGAGAAATTTCCCAAACAGTTTTGTATAAAC 99545 Query 24884 TCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAG- 24942 || || ||||| || | || |||| |||||| || ||||| ||| | ||| Sbjct 99544 TC-TTCATCTCCTCCGGCACACCATCAATGGTTTGAATGGAACCATTATCTTT---TAGA 99489 Query 24943 ATTCAATCTCATA---TTCGGTGTCCAAAGATTAATTTTTTCAAGATCTCTAATCAAGTG 24999 |||| || | || || || |||| | || ||||| || ||| | || | Sbjct 99488 ATTCTATTTTTTAGCTTTTCGT-TCCATACTTTCATTTTACAAAAATCATCCACCATATA 99430 Query 25000 TTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCT--TATTGATAAGTTTGAAGTG 25057 || ||| | ||| ||||||||||||| | || || || || |||| || || || Sbjct 99429 TTGATTAACGATTGTAAATTCTCCAGATAGCACCCTCCTGGAATAGATA--TTAGAGGTC 99372 Query 25058 AATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAAT 25117 | ||||| || |||| | || || ||||||||||| || || ||||||||| Sbjct 99371 ATAGGTTCGAACGATTCTGTGAAACCCAATATTTGAGAAGTTGAGGCAGTTGGCATTGGA 99312 Query 25118 GCTATTAATAGCGAATTTCTCAAACCA---TATTTAACAATCTCTTGTTTTAATTTATCC 25174 | | ||| || ||||| ||||||||| ||| ||| | ||| ||||| ||||| Sbjct 99311 CCAACTAAAAGTGAATTCCTCAAACCAGGCCCATTAGTAATTTGTTGCTTTAAGGTATCC 99252 Query 25175 CAATC 25179 ||||| Sbjct 99251 CAATC 99247 >seq8 Length=958696 Score = 150 bits (166), Expect = 9e-32 Identities = 323/478 (68%), Gaps = 6/478 (1%) Strand=Plus/Plus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 |||||| |||| ||| |||||| | || | ||| ||| ||| ||| || | |||||| Sbjct 335152 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGG 335211 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 ||||| | ||| || || ||||| || | |||||||| || ||||| |||||| | Sbjct 335212 ATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTG 335271 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068 | || | ||| || || ||||||||||||||||| || | || | || || ||| Sbjct 335272 ATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCA 335331 Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128 ||| || |||||||| || ||||| | ||||| | |||||||| | |||| Sbjct 335332 GGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATT 335391 Query 26129 GGAACTAATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 |||| |||| | ||| ||| ||||| || | | ||| | || || || || | ||| Sbjct 335392 GGAA-TAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAAT 335450 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAA 26245 | |||| || | ||| || |||||||| || || || ||||| || | || Sbjct 335451 GTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAA 335510 Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305 | || ||| |||| |||| ||| ||| | ||||| | | || ||||| || || Sbjct 335511 A--GTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGAC 335568 Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATC 26363 | ||| | ||||| || || | ||| || | ||| || | ||| || || | |||| Sbjct 335569 ATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATC 335626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039975328600