Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq2 132 9e-26
seq3 127 4e-24
seq5 118 2e-21
>seq2
Length=1698977
Score = 132 bits (146), Expect = 9e-26
Identities = 169/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || ||||| || | |||| || || ||| || || ||
Sbjct 909057 ATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCG 908998
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||| |||| | | || || ||||| ||||| ||||| || ||||| ||||| || ||
Sbjct 908997 GATAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGA 908938
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| || ||| || ||||| |||| || || |||||
Sbjct 908937 GGAATACCTTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCA 908878
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||||| | ||| ||||| ||||| ||||| || || | ||| || ||||||||
Sbjct 908877 ACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTTT 908825
Score = 122 bits (134), Expect = 2e-22
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
||||||||||| | | || ||||| || | |||| || ||| || || || || ||
Sbjct 909285 ATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGA-ATGTTGTAGTC 909227
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|||| |||| | | || || ||||||||||||||||| || ||||| ||||| || ||
Sbjct 909226 GGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGG 909167
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || ||||| || ||||| || ||| || ||||| |||| || || |||||
Sbjct 909166 AGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTC 909107
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | ||| |||||||| || || || || || | || || |||||
Sbjct 909106 AACTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 909056
Score = 100 bits (110), Expect = 6e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || || || |||| |||| | | || || ||||| ||||||||||| || |||||
Sbjct 909466 GATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCT 909407
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
||||| || || || || ||||| || ||||| || ||| || ||||| ||||
Sbjct 909406 TTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGT 909347
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|| || ||||| ||||| | ||| || || ||||| || || || || | || || ||
Sbjct 909346 GTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTG 909287
Query 192534 CAT 192536
|||
Sbjct 909286 CAT 909284
>seq3
Length=1603786
Score = 127 bits (140), Expect = 4e-24
Identities = 162/223 (73%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||||||||||||| || | || || || || | || | || || ||| |
Sbjct 1548420 GTTCAATAATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGT 1548479
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||| || |||| | || |||||||| |||||||||||||| ||||| ||||
Sbjct 1548480 TGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 1548539
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| || ||||| || ||||| || ||||| || || || ||||| || | || |
Sbjct 1548540 GGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAG 1548599
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
| ||||| ||||| | ||| ||||| |||||||| || || ||
Sbjct 1548600 AAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTT 1548642
>seq5
Length=1351113
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || || | |||| || || ||| || || |||||
Sbjct 1192851 ACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGA 1192792
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| |||| |||||||| |||||||||||||| ||||| ||||| || || ||
Sbjct 1192791 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGG 1192732
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || ||| || ||||| || | || || ||||| ||
Sbjct 1192731 AATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGAC 1192672
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||| | ||||| || |||||||||| || || | || || |||||
Sbjct 1192671 TTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1192624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479899090800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |