Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 1e-30
seq3 129 1e-24
seq5 120 5e-22
>seq2
Length=1698977
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || ||||| || | |||| || || ||| || || ||
Sbjct 909285 ATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCG 909226
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || || | |||| || |||||||||||||||||||| ||||| |||||||| ||
Sbjct 909225 GATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGA 909166
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || ||| || ||||| ||||| || || |||||
Sbjct 909165 GGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCA 909106
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| |||||||| || || || || || | ||| || |||||
Sbjct 909105 ACTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 909056
Score = 145 bits (160), Expect = 1e-29
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || ||||| || | |||| || || || || || ||
Sbjct 909057 ATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCG 908998
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || || | |||| || ||||| ||||| |||||||| ||||| |||||||| ||
Sbjct 908997 GATAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGA 908938
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| || ||| || ||||| ||||| || || |||||
Sbjct 908937 GGAATACCTTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCA 908878
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| | ||| ||||| ||||| ||||| || || | || || ||||||||
Sbjct 908877 ACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTTT 908825
Score = 122 bits (134), Expect = 2e-22
Identities = 136/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| || || || |||| || || | |||| || ||||| |||||||||||||| |||||
Sbjct 909465 ATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTT 909406
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|||||||| || || || ||||| || ||||| || ||| || ||||| |||||
Sbjct 909405 TGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTG 909346
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || ||||| ||||| | ||| || || ||||| || || || || | ||| || |||
Sbjct 909345 TCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGC 909286
Query 172068 AT 172069
||
Sbjct 909285 AT 909284
>seq3
Length=1603786
Score = 129 bits (142), Expect = 1e-24
Identities = 163/224 (73%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|||||||||||||| |||| || || || || | || | || || || || ||
Sbjct 1548425 ATAATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAG 1548484
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || |||| || |||| |||||||| ||||||||||| || ||||| ||||||||
Sbjct 1548485 TCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCT 1548544
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||||| || || || || |||
Sbjct 1548545 GGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGAT 1548604
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
|| ||||| | ||| ||||| |||||||| || || || | |||
Sbjct 1548605 TCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 1548648
>seq5
Length=1351113
Score = 120 bits (132), Expect = 5e-22
Identities = 168/236 (71%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || | |||| || || || ||
Sbjct 1192859 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTG 1192800
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||| ||||||||||| || ||||| ||||||
Sbjct 1192799 TAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 1192740
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|| || || || ||||| || ||||| || ||| || ||||| || || || ||
Sbjct 1192739 TCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAA 1192680
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||| | ||||| || |||||||||| || || | ||| || |||||
Sbjct 1192679 GATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1192624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135909486400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |