Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 1e-24
seq2 129 1e-24
seq5 122 2e-22
>seq3
Length=1603786
Score = 129 bits (142), Expect = 1e-24
Identities = 145/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 1548633 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATTGACAATGTCAAGTCC 1548574
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| |||||| | ||||| || || |||
Sbjct 1548573 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 1548514
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || |||||| | || |||||| |||| || || || || ||||||
Sbjct 1548513 CAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCCTTCAC 1548454
Query 206374 CTTGTTTTGAGACT 206387
| || ||||||||
Sbjct 1548453 TTGGTCTTGAGACT 1548440
>seq2
Length=1698977
Score = 129 bits (142), Expect = 1e-24
Identities = 162/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| || || ||| ||| ||| | ||||| || || |||||||||||||| |||
Sbjct 908825 AAAATG---CAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAA 908881
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
||||||||| | || || ||| ||||| ||||| || ||||| ||| ||
Sbjct 908882 TCTTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCA 908941
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| |||||| | || || || || ||||| || ||||| ||||| ||| | ||||
Sbjct 908942 GACCAACAAAGATTGATTTTTGCGGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGAC 909001
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|||||| |||| || || ||||| |||||| | || ||||||
Sbjct 909002 TACAACATCCAAAAGGAATCTACACTTCACTTAGTCTTGAGA 909043
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
||||| ||||| |||||||||||||| ||| ||||||||| | || || |||
Sbjct 909080 ACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTGAAGTCT 909139
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| |||||| | || || || || ||
Sbjct 909140 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAA 909199
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| || ||||| ||||| ||| | |||| |||||| | || || || ||||| ||||||
Sbjct 909200 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATTCAAAAGGAATCTACACTTCAC 909259
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 909260 TTAGTCTTGAGA 909271
Score = 114 bits (126), Expect = 3e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
||||| || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 909308 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGACAATGTGAAGTCT 909367
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| |||||| | || || || || |||
Sbjct 909368 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAG 909427
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| || ||||| ||||| ||| | |||| |||||| |||| || || || || || |||
Sbjct 909428 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATCCAAAAGGAATCCACACTCCAC 909487
Query 206374 CTTGTTTTGAG 206384
| || |||||
Sbjct 909488 TTGGTCTTGAG 909498
>seq5
Length=1351113
Score = 122 bits (134), Expect = 2e-22
Identities = 148/202 (73%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || || || || |||||||| ||| ||| ||||| | ||
Sbjct 1192638 CAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCCGACACCATTGACAA 1192697
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || ||||| ||| || ||| |||||| | |||||
Sbjct 1192698 TGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATCTT 1192757
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || ||||| ||||||||||| || |||||| | || |||||| |||| || || ||
Sbjct 1192758 TGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATC 1192817
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
||| |||||| | || ||||||
Sbjct 1192818 TACCCTTCACTTGGTCTTGAGA 1192839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820678863368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |