Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 129 1e-24 seq2 129 1e-24 seq5 122 2e-22 >seq3 Length=1603786 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 1548633 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATTGACAATGTCAAGTCC 1548574 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 1548573 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 1548514 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || |||||| | || |||||| |||| || || || || |||||| Sbjct 1548513 CAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCCTTCAC 1548454 Query 206374 CTTGTTTTGAGACT 206387 | || |||||||| Sbjct 1548453 TTGGTCTTGAGACT 1548440 >seq2 Length=1698977 Score = 129 bits (142), Expect = 1e-24 Identities = 162/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| || || ||| ||| ||| | ||||| || || |||||||||||||| ||| Sbjct 908825 AAAATG---CAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAA 908881 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||||||||| | || || ||| ||||| ||||| || ||||| ||| || Sbjct 908882 TCTTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCA 908941 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| |||||| | || || || || ||||| || ||||| ||||| ||| | |||| Sbjct 908942 GACCAACAAAGATTGATTTTTGCGGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGAC 909001 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||||| |||| || || ||||| |||||| | || |||||| Sbjct 909002 TACAACATCCAAAAGGAATCTACACTTCACTTAGTCTTGAGA 909043 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| ||||| |||||||||||||| ||| ||||||||| | || || ||| Sbjct 909080 ACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTGAAGTCT 909139 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | || || || || || Sbjct 909140 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAA 909199 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || ||||| ||||| ||| | |||| |||||| | || || || ||||| |||||| Sbjct 909200 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATTCAAAAGGAATCTACACTTCAC 909259 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 909260 TTAGTCTTGAGA 909271 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 909308 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGACAATGTGAAGTCT 909367 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | || || || || ||| Sbjct 909368 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAG 909427 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || ||||| ||||| ||| | |||| |||||| |||| || || || || || ||| Sbjct 909428 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATCCAAAAGGAATCCACACTCCAC 909487 Query 206374 CTTGTTTTGAG 206384 | || ||||| Sbjct 909488 TTGGTCTTGAG 909498 >seq5 Length=1351113 Score = 122 bits (134), Expect = 2e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || || || |||||||| ||| ||| ||||| | || Sbjct 1192638 CAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCCGACACCATTGACAA 1192697 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||| ||| || ||| |||||| | ||||| Sbjct 1192698 TGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATCTT 1192757 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| ||||||||||| || |||||| | || |||||| |||| || || || Sbjct 1192758 TGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATC 1192817 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| |||||| | || |||||| Sbjct 1192818 TACCCTTCACTTGGTCTTGAGA 1192839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820678863368